RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 RTN2O75298 545 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 SRPRAP08240 638 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 C7P10643 843 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 TACR2P21452 398 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 MZF1P28698 734 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 NNMTP40261 264 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ARRB1P49407 418 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ACADVLP49748 655 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 CCR5P51681 352 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ADPRHP54922 357 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 CCDC40Q4G0X9 1142 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 SLC45A4Q5BKX6 768 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 SPATS2Q86XZ4 545 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ARHGEF19Q8IW93 802 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ZNF557Q8N988 423 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 KLK6Q92876 244 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 NXPE2Q96DL1 559 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 HSFY1Q96LI6 401 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 SERPINB11Q96P15 392 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 MYOCQ99972 504 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 CAAP1Q9H8G2 361 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 ADAMTS1Q9UHI8 967 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 FZD4Q9ULV1 537 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 FBXO21O94952 628 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 APOEP02649 317 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 KRT5P13647 590 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 ZNF18P17022 549 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 C5AR1P21730 350 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 EPHA8P29322 1005 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 NXPH1P58417 271 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 PITX1P78337 314 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 C19orf57Q0VDD7 668 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 CCDC173Q0VFZ6 552 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 DENND1BQ6P3S1 775 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 FBXL19Q6PCT2 694 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 KDM7AQ6ZMT4 941 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 PRPF39Q86UA1 669 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 SLC39A13Q96H72 371 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 NAF1Q96HR8 494 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 RMND1Q9NWS8 449 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
TRAFD1-205ENST00000548277 RRP8O43159 456 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 ADH1BP00325 375 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 GLDCP23378 1020 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 DRD3P35462 400 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 GPD2P43304 727 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 STAT4Q14765 748 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 TAF5Q15542 800 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 KIF26BQ2KJY2 2108 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 KLHL10Q6JEL2 608 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 FMR1NBQ8N0W7 255 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 ATP6V0D2Q8N8Y2 350 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 TSC1Q92574 1164 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 SMARCE1Q969G3 411 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 RNF34Q969K3 372 aa12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 UBL7Q96S82 380 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-205ENST00000548277 E9PAM4 449 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 F5H5T6 163 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 SLC31A1O15431 190 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 BRINP1O60477 761 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 TRUB2O95900 331 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 C1SP09871 688 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 MYF5P13349 255 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 CKMT2P17540 419 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 GGCXP38435 758 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 DAB2P98082 770 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 STILQ15468 1287 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 NAPEPLDQ6IQ20 393 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 CCAR2Q8N163 923 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 MFSD2AQ8NA29 543 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 KDM1BQ8NB78 822 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 FCRL3Q96P31 734 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 OSBPL2Q9H1P3 480 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 PRORYQ9H606 182 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 METTL14Q9HCE5 456 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 ACP6Q9NPH0 428 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 ARHGAP20Q9P2F6 1191 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 SLC12A6Q9UHW9 1150 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 CYTH4Q9UIA0 394 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 ITIH6Q6UXX5 1313 aa12.32□□□□□ -0.44
TRAFD1-205ENST00000548277 E5RJQ4 531 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 TRIM38O00635 465 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 YKT6O15498 198 aa12.31□□□□□ -0.44
TRAFD1-205ENST00000548277 FFAR2O15552 330 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms