RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	CLEC16A	Q2KHT3	1053 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	C2CD6	Q53TS8	623 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	DAB2IP	Q5VWQ8	1189 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	USP30	Q70CQ3	517 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	C14orf80	Q86SX3	495 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	SETD3	Q86TU7	594 aa	Predicted RBP	13.8	□□□□□ -0.2
POLE-222	ENST00000545015	CIR1	Q86X95	450 aa	Predicted RBP	13.8	□□□□□ -0.2
POLE-222	ENST00000545015	ZNF366	Q8N895	744 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	BAP1	Q92560	729 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	CENPI	Q92674	756 aa	Predicted RBP	13.8	□□□□□ -0.2
POLE-222	ENST00000545015	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.8	□□□□□ -0.2
POLE-222	ENST00000545015	CFAP57	Q96MR6	1250 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	FEM1A	Q9BSK4	669 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	SYT11	Q9BT88	431 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	RETREG1	Q9H6L5	497 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	TMEM9B	Q9NQ34	198 aa		13.8	□□□□□ -0.2
POLE-222	ENST00000545015	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.79	□□□□□ -0.2
POLE-222	ENST00000545015	TCRBV5S1A1T	A0A578	114 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	C4orf47	A7E2U8	309 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	UPK3BL1	B0FP48	263 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	UPK3BL2	E5RIL1	263 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	ATP9B	O43861	1147 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	SIN3B	O75182	1162 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	DNTT	P04053	509 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	CALB1	P05937	261 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	PDGFRA	P16234	1089 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	PTMS	P20962	102 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	NNMT	P40261	264 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	IRAK1	P51617	712 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	C1QBP	Q07021	282 aa	Known RBP	13.79	□□□□□ -0.2
POLE-222	ENST00000545015	SFSWAP	Q12872	951 aa	Known RBP	13.79	□□□□□ -0.2
POLE-222	ENST00000545015	ZNF177	Q13360	481 aa	Predicted RBP	13.79	□□□□□ -0.2
POLE-222	ENST00000545015	TTC31	Q49AM3	519 aa	Predicted RBP	13.79	□□□□□ -0.2
POLE-222	ENST00000545015	LRRC31	Q6UY01	552 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	MON1B	Q7L1V2	547 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	STRADA	Q7RTN6	431 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	IRF2BP2	Q7Z5L9	587 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	C3orf20	Q8ND61	904 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	OR52K2	Q8NGK3	314 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	C1orf216	Q8TAB5	229 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	SLC30A5	Q8TAD4	765 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	FRS2	Q8WU20	508 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	PTPRN2	Q92932	1015 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	AGPAT1	Q99943	283 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	C11orf70	Q9BRQ4	267 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	GPR174	Q9BXC1	333 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	SIK2	Q9H0K1	926 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	SGK2	Q9HBY8	427 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	OSGEP	Q9NPF4	335 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	METTL5	Q9NRN9	209 aa	Known RBP	13.79	□□□□□ -0.2
POLE-222	ENST00000545015	ZNF212	Q9UDV6	495 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	SLCO3A1	Q9UIG8	710 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	NCOR2	Q9Y618	2525 aa		13.79	□□□□□ -0.2
POLE-222	ENST00000545015	GON4L	Q3T8J9	2241 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	CXorf51A	A0A1B0GTR3	108 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	TTC34	A8MYJ7	566 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	RNASEH1	O60930	286 aa	Known RBP	13.78	□□□□□ -0.2
POLE-222	ENST00000545015	KRT3	P12035	628 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	GNS	P15586	552 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ENG	P17813	658 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ELAVL3	Q14576	367 aa	Known RBP	13.78	□□□□□ -0.2
POLE-222	ENST00000545015	CCDC14	Q49A88	953 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	FILIP1L	Q4L180	1135 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ALF	Q53S48	1182 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	PPM1J	Q5JR12	505 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	RNF219	Q5W0B1	726 aa	Predicted RBP	13.78	□□□□□ -0.2
POLE-222	ENST00000545015	PPP1R2P3	Q6NXS1	205 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ZNF783	Q6ZMS7	281 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	DEFB119	Q8N690	84 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	EMC1	Q8N766	993 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	RXFP2	Q8WXD0	754 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	FAM131C	Q96AQ9	280 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	FAM129B	Q96TA1	746 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	EDEM3	Q9BZQ6	932 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	BTBD1	Q9H0C5	482 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	PABPC3	Q9H361	631 aa	Known RBP	13.78	□□□□□ -0.2
POLE-222	ENST00000545015	MTG2	Q9H4K7	406 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ADAM22	Q9P0K1	906 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ADAMTS1	Q9UHI8	967 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	HS3ST2	Q9Y278	367 aa		13.78	□□□□□ -0.2
POLE-222	ENST00000545015	ATXN2	Q99700	1313 aa	Known RBP	13.78	□□□□□ -0.2
POLE-222	ENST00000545015		A0A1B0GTW7	788 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	SIGLEC16	A6NMB1	481 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015		E9PAM4	449 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	ARHGAP33	O14559	1287 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	ALOX15B	O15296	676 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	CNTN5	O94779	1100 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	ADRB1	P08588	477 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	CSRP1	P21291	193 aa	Known RBP	13.77	□□□□□ -0.21
POLE-222	ENST00000545015	SDC4	P31431	198 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	ACSL1	P33121	698 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	ADRA1B	P35368	520 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	GGCX	P38435	758 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	PRKCI	P41743	596 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	GFPT1	Q06210	699 aa	Predicted RBP	13.77	□□□□□ -0.21
POLE-222	ENST00000545015	NR1I3	Q14994	352 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	CST6	Q15828	149 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	FIGN	Q5HY92	759 aa		13.77	□□□□□ -0.21
POLE-222	ENST00000545015	MANEAL	Q5VSG8	457 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms