RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 MTSS1LQ765P7 747 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 OTOAQ7RTW8 1153 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SNRNP27Q8WVK2 155 aaKnown RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SHC3Q92529 594 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CPB2Q96IY4 423 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SPATA13Q96N96 652 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 POP1Q99575 1024 aaKnown RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 KLHL4Q9C0H6 718 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SEMA4AQ9H3S1 761 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 MIEF1Q9NQG6 463 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 KCNK4Q9NYG8 393 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CAB39Q9Y376 341 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 GNRH1P01148 92 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 ATXN8OSP0DMR3 200 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 RAG1P15918 1043 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 ITGB6P18564 788 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 HALP42357 657 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 ZNF143P52747 638 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CRYMQ14894 314 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 AMHR2Q16671 573 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 HYIQ5T013 277 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 FBXW10Q5XX13 1052 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 FAM71AQ8IYT1 594 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 EPS8L1Q8TE68 723 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 DNAJB3Q8WWF6 145 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 ZNF670Q9BS34 389 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 ADAM33Q9BZ11 813 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CAAP1Q9H8G2 361 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 EVA1BQ9NVM1 165 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SFMBT1Q9UHJ3 866 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 GNG14A0A1W2PPG7 69 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 C2CD2LO14523 706 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CKBP12277 381 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 EPB42P16452 691 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 DGKAP23743 735 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 TTKP33981 857 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CLCN5P51795 746 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 RHBDL3P58872 404 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CDC16Q13042 620 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 BTG3Q14201 252 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 ZBTB49Q6ZSB9 765 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
NECAP1-207ENST00000544891 PHACTR4Q8IZ21 702 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 KIF2BQ8N4N8 673 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 PPP1R16AQ96I34 528 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SENP8Q96LD8 212 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 TBL1YQ9BQ87 522 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SLC39A8Q9C0K1 460 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 STMN3Q9NZ72 180 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 GPRC5DQ9NZD1 345 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 CPA4Q9UI42 421 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 SATB2Q9UPW6 733 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 NDUFAF1Q9Y375 327 aa9.18□□□□□ -0.94
NECAP1-207ENST00000544891 TK2O00142 265 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 RGS14O43566 566 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 PECAM1P16284 738 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 KDELR1P24390 212 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 HNRNPH1P31943 449 aaKnown RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 HTR7P34969 479 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CHKAP35790 457 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 FRG1Q14331 258 aaKnown RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CYP2A13Q16696 494 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 AGKQ53H12 422 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 N4BP2L1Q5TBK1 243 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 KCNT2Q6UVM3 1135 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 BBS12Q6ZW61 710 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 AENQ8WTP8 325 aaKnown RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 ACSF2Q96CM8 615 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 C19orf60Q96EN9 201 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 FAXDC2Q96IV6 333 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 TINF2Q9BSI4 451 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CIPCQ9C0C6 399 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 TMEM216Q9P0N5 145 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 ARHGAP28Q9P2N2 729 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 COPG2Q9UBF2 871 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 RPS6KB2Q9UBS0 482 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 ANKRD31Q8N7Z5 1873 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 KLHL41O60662 606 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 RECQL5O94762 991 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 PARNO95453 639 aaKnown RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CSH1P0DML2 217 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CSH2P0DML3 217 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 HPGDP15428 266 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 TFE3P19532 575 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 TCN1P20061 433 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 ME2P23368 584 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 ATP5C1P36542 298 aaKnown RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CCT8P50990 548 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 XRCC4Q13426 336 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 LRRC36Q1X8D7 754 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CBWD3Q5JTY5 395 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 CBWD5Q5RIA9 395 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 INTS11Q5TA45 600 aaKnown RBP9.17□□□□□ -0.94
NECAP1-207ENST00000544891 ARCQ7LC44 396 aa9.17□□□□□ -0.94
NECAP1-207ENST00000544891 LUZP2Q86TE4 346 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms