RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TCEA2Q15560 299 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ZACNQ401N2 412 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 IZUMO2Q6UXV1 221 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 GPR152Q8TDT2 470 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 TM6SF2Q9BZW4 377 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 TPP1O14773 563 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 PDE5AO76074 875 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 CYP2A7P20853 494 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 RPL22P35268 128 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 SERPINH1P50454 418 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 FASTKQ14296 549 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 NEPROQ6NW34 567 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 LLGL2Q6P1M3 1020 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 TATDN1Q6P1N9 297 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 ROGDIQ9GZN7 287 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 ZDHHC6Q9H6R6 413 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 CYP7B1O75881 506 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 TBCELQ5QJ74 424 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 PLPPR4Q7Z2D5 763 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 PSTKQ8IV42 348 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 ATG16L2Q8NAA4 619 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 GRIN3AQ8TCU5 1115 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 MYLPFQ96A32 169 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 MTFMTQ96DP5 389 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 BBS2Q9BXC9 721 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 A0A0A0MRY4 1105 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 MAP3K13O43283 966 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 LIASO43766 372 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 GOT1P17174 413 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 FUT2Q10981 343 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 SPATA13Q96N96 652 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 SERPINI2O75830 405 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 NFKB1P19838 968 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 MAPK9P45984 424 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 SLC30A9Q6PML9 568 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 CHMP1BQ7LBR1 199 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 KRT78Q8N1N4 520 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 CCDC3Q9BQI4 270 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 SPG21Q9NZD8 308 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 ZNF112Q9UJU3 913 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 PIRTP0C851 137 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 RRM2P31350 389 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 HSPA13P48723 471 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 NOMO3P69849 1222 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 OTUD3Q5T2D3 398 aaPredicted RBP13.03□□□□□ -0.32
CHD4-211ENST00000544484 CYP2R1Q6VVX0 501 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 APBB2Q92870 758 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 RNF157Q96PX1 679 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 VAT1Q99536 393 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
CHD4-211ENST00000544484 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 SLC15A5A6NIM6 579 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 TMEM114B3SHH9 223 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 INPP4BO15327 924 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 UNC5AQ6ZN44 842 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 PRELID2Q8N945 189 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 TRPC4APQ8TEL6 797 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 KLRG1Q96E93 195 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.32
CHD4-211ENST00000544484 NRDE2Q9H7Z3 1164 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 UXTQ9UBK9 157 aaPredicted RBP13.02□□□□□ -0.32
CHD4-211ENST00000544484 MAGEA13PA6NCF6 341 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 PIGNO95427 931 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.32
CHD4-211ENST00000544484 FAM9CQ8IZT9 166 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 HSFY1Q96LI6 401 aa13.02□□□□□ -0.32
CHD4-211ENST00000544484 FBXO6Q9NRD1 293 aaPredicted RBP13.02□□□□□ -0.32
CHD4-211ENST00000544484 RGS5O15539 181 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 OR56A5P0C7T3 313 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 ARF4P18085 180 aaPredicted RBP13.02□□□□□ -0.33
CHD4-211ENST00000544484 CCT8P50990 548 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 TAS2R40P59535 323 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
CHD4-211ENST00000544484 MTSS1LQ765P7 747 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 DENND1CQ8IV53 801 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 ANKRD52Q8NB46 1076 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 LENG9Q96B70 501 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 EXOC2Q96KP1 924 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 LGMNQ99538 433 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 SEMA4BQ9NPR2 832 aaPredicted RBP13.02□□□□□ -0.33
CHD4-211ENST00000544484 NDUFAF1Q9Y375 327 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 TOMM70O94826 608 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 GSSP48637 474 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 ANXA11P50995 505 aaKnown RBP13.02□□□□□ -0.33
CHD4-211ENST00000544484 CRYMQ14894 314 aa13.02□□□□□ -0.33
CHD4-211ENST00000544484 MCOLN3Q8TDD5 553 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms