RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 HOXB2P14652 356 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 TCF4P15884 667 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 RHOQP17081 205 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 POLR2EP19388 210 aaKnown RBP19.66■□□□□ 0.74
DDX55-211ENST00000544429 IL1R2P27930 398 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 ERMARDQ5T6L9 678 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 DAB2IPQ5VWQ8 1189 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 ZNF783Q6ZMS7 281 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 WDR5BQ86VZ2 330 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 LONP2Q86WA8 852 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 TMTC1Q8IUR5 882 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 CYB5D2Q8WUJ1 264 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 EIF3CQ99613 913 aaKnown RBP19.66■□□□□ 0.74
DDX55-211ENST00000544429 SNRNP25Q9BV90 132 aaKnown RBP19.66■□□□□ 0.74
DDX55-211ENST00000544429 TMEM248Q9NWD8 314 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 USP18Q9UMW8 372 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 NYNRINQ9P2P1 1898 aaKnown RBP19.66■□□□□ 0.74
DDX55-211ENST00000544429 MYO1FO00160 1098 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 PRKCHP24723 683 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 HTR7P34969 479 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 FNTBP49356 437 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 SLC25A11Q02978 314 aaKnown RBP19.65■□□□□ 0.74
DDX55-211ENST00000544429 CA9Q16790 459 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 KIAA1211LQ6NV74 962 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 TFAP2DQ7Z6R9 452 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 MDGA1Q8NFP4 955 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 TSTD1Q8NFU3 115 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 SLC35G2Q8TBE7 412 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 ATOH1Q92858 354 aaPredicted RBP19.65■□□□□ 0.74
DDX55-211ENST00000544429 TBC1D31Q96DN5 1066 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 PSMB7Q99436 277 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 OSGEPQ9NPF4 335 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 CTTNBP2NLQ9P2B4 639 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 PCSK1NQ9UHG2 260 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 AP4E1Q9UPM8 1137 aa19.65■□□□□ 0.74
DDX55-211ENST00000544429 ILVBLA1L0T0 632 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 SOWAHDA6NJG2 315 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 WASH4PA8MWX3 477 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 PRPSAP2O60256 369 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 PROSCO94903 275 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 MOCS3O95396 460 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 SRPRAP08240 638 aaKnown RBP19.64■□□□□ 0.73
DDX55-211ENST00000544429 OR1E1P30953 314 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 WASP42768 502 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 CTSOP43234 321 aaPredicted RBP19.64■□□□□ 0.73
DDX55-211ENST00000544429 MAPKAPK2P49137 400 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 CAMK2GQ13555 558 aaPredicted RBP19.64■□□□□ 0.73
DDX55-211ENST00000544429 C6orf118Q5T5N4 469 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 SDE2Q6IQ49 451 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 RHOT2Q8IXI1 618 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 RFFLQ8WZ73 363 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 PPP1R9BQ96SB3 815 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 EPAS1Q99814 870 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 POLMQ9NP87 494 aaPredicted RBP19.64■□□□□ 0.73
DDX55-211ENST00000544429 NDFIP2Q9NV92 336 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 FAM86C1Q9NVL1 165 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 GPATCH2LQ9NWQ4 482 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 LCMT1Q9UIC8 334 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 PLA2G4CQ9UP65 541 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 ERVW-1Q9UQF0 538 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 EPN1Q9Y6I3 576 aaPredicted RBP19.64■□□□□ 0.73
DDX55-211ENST00000544429 SPAG17Q6Q759 2223 aa19.64■□□□□ 0.73
DDX55-211ENST00000544429 NUP205Q92621 2012 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 A0A0D9SEW6 157 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 NDUFA10O95299 355 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 GABRG2P18507 467 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 MAN1A1P33908 653 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 CYLC1P35663 651 aaPredicted RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 PXNP49023 591 aaPredicted RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 HADHBP55084 474 aaKnown RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 ECT2LQ008S8 904 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 SULT2A1Q06520 285 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 DPYSL2Q16555 572 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 BOLA3Q53S33 107 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 RNF219Q5W0B1 726 aaPredicted RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 TXNRD3NBQ6F5E7 133 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 ZC3H14Q6PJT7 736 aaKnown RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 SERPINA13PQ6UXR4 307 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 RAD9BQ6WBX8 426 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 SPC24Q8NBT2 197 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 FAM71BQ8TC56 605 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 TEKT4Q8WW24 435 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 NOL6Q9H6R4 1146 aaKnown RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 REXO2Q9Y3B8 237 aaKnown RBP19.63■□□□□ 0.73
DDX55-211ENST00000544429 RAD54BQ9Y620 910 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 R4GN57 208 aa19.63■□□□□ 0.73
DDX55-211ENST00000544429 CXorf51AA0A1B0GTR3 108 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 RHOCP08134 193 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 CNR2P34972 360 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 MAGEA1P43355 309 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 HCAR3P49019 387 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 ZNF135P52742 658 aaPredicted RBP19.62■□□□□ 0.73
DDX55-211ENST00000544429 CPNE8Q86YQ8 564 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 RTL3Q8N8U3 475 aaKnown RBP19.62■□□□□ 0.73
DDX55-211ENST00000544429 DCAF4L2Q8NA75 395 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 KCTD15Q96SI1 283 aaPredicted RBP19.62■□□□□ 0.73
DDX55-211ENST00000544429 PHOX2BQ99453 314 aa19.62■□□□□ 0.73
DDX55-211ENST00000544429 BAG1Q99933 345 aaPredicted RBP19.62■□□□□ 0.73
DDX55-211ENST00000544429 ACE2Q9BYF1 805 aaPredicted RBP19.62■□□□□ 0.73
DDX55-211ENST00000544429 PCDHA13Q9Y5I0 950 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms