RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 PENKP01210 267 aaPredicted RBP14.03□□□□□ -0.16
VPS33A-208ENST00000543633 CYP2C9P11712 490 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 AIF1P55008 147 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 CRADDP78560 199 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 FOLH1Q04609 750 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 IFRD2Q12894 506 aaPredicted RBP14.03□□□□□ -0.16
VPS33A-208ENST00000543633 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
VPS33A-208ENST00000543633 SOWAHAQ2M3V2 549 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 GRAMD1BQ3KR37 738 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 SLC25A52Q3SY17 297 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 BNIPLQ7Z465 357 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 ARHGAP22Q7Z5H3 698 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 TMEM135Q86UB9 458 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 CRYBG2Q8N1P7 616 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 ADCY4Q8NFM4 1077 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 B3GNT5Q9BYG0 378 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 ILKAPQ9H0C8 392 aaPredicted RBP14.03□□□□□ -0.16
VPS33A-208ENST00000543633 MRGBPQ9NV56 204 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 VTI1BQ9UEU0 232 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 SCN1AP35498 2009 aa14.03□□□□□ -0.16
VPS33A-208ENST00000543633 FBXO21O94952 628 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 AP2A1O95782 977 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 CAPNS1P04632 268 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 SMIM18P0DKX4 95 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 DNAJB2P25686 324 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 RPL5P46777 297 aaKnown RBP14.02□□□□□ -0.16
VPS33A-208ENST00000543633 ERFP50548 548 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 CREB5Q02930 508 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 ADGRE1Q14246 886 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 TTLL4Q14679 1199 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 BNC2Q6ZN30 1099 aaPredicted RBP14.02□□□□□ -0.16
VPS33A-208ENST00000543633 PDZD4Q76G19 769 aaPredicted RBP14.02□□□□□ -0.16
VPS33A-208ENST00000543633 TMC7Q7Z402 723 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 AHI1Q8N157 1196 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 ZNF781Q8N8C0 355 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 TDRD5Q8NAT2 981 aaKnown RBP14.02□□□□□ -0.16
VPS33A-208ENST00000543633 RNF139Q8WU17 664 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 OPTNQ96CV9 577 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 DCUN1D1Q96GG9 259 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 LGMNQ99538 433 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 NDNQ99608 321 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 MRPS26Q9BYN8 205 aaKnown RBP14.02□□□□□ -0.16
VPS33A-208ENST00000543633 BRD8Q9H0E9 1235 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 ZNF385DQ9H6B1 395 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 INPP5FQ9Y2H2 1132 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 SNX9Q9Y5X1 595 aa14.02□□□□□ -0.16
VPS33A-208ENST00000543633 FNDC1Q4ZHG4 1894 aaPredicted RBP14.02□□□□□ -0.17
VPS33A-208ENST00000543633 GOLGA8QA0A0J9YX86 632 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 MAGEB16A2A368 324 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 GOLGA8OA6NCC3 632 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 UNCXA6NJT0 531 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 BTBD19C9JJ37 291 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 GOLGA8NF8WBI6 632 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 AP3B1O00203 1094 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 MATN2O00339 956 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 HDAC3O15379 428 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 MTSS1O43312 755 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 ERVK-10P10266 1014 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 PIK3R1P27986 724 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 GRIA2P42262 883 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 CSRP3P50461 194 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 VGLL4Q14135 290 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 SLC9B1Q4ZJI4 515 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 PPM1JQ5JR12 505 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 TCHHL1Q5QJ38 904 aaPredicted RBP14.02□□□□□ -0.17
VPS33A-208ENST00000543633 VWA5B1Q5TIE3 1220 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF410Q86VK4 478 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 TICAM1Q8IUC6 712 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF567Q8N184 647 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 KYQ8NBH2 561 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 BEST2Q8NFU1 509 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 DGCR14Q96DF8 476 aaKnown RBP14.02□□□□□ -0.17
VPS33A-208ENST00000543633 MCMBPQ9BTE3 642 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 IL22Q9GZX6 179 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 DRC3Q9H069 523 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 RNPEPQ9H4A4 650 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF696Q9H7X3 374 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 CASS4Q9NQ75 786 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 BFARQ9NZS9 450 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 TMCO1Q9UM00 188 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 PADI4Q9UM07 663 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 AKT3Q9Y243 479 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 NME7Q9Y5B8 376 aa14.02□□□□□ -0.17
VPS33A-208ENST00000543633 TSC2P49815 1807 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 A0A096LPK6 155 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 NCAM2O15394 837 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 ADCY6O43306 1168 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 INSRRP14616 1297 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 ATXN1P54253 815 aaKnown RBP14.01□□□□□ -0.17
VPS33A-208ENST00000543633 LAMB3Q13751 1172 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 DPYSQ14117 519 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 ZBTB6Q15916 424 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 LRRC36Q1X8D7 754 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 USP41Q3LFD5 358 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 INTS6LQ5JSJ4 861 aaKnown RBP14.01□□□□□ -0.17
VPS33A-208ENST00000543633 SH2D4BQ5SQS7 431 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 FAM182AQ5T1J6 154 aa14.01□□□□□ -0.17
VPS33A-208ENST00000543633 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms