RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 RPRD1AQ96P16 312 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 KIAA1683Q9H0B3 1180 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 MRASO14807 208 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 CHADO15335 359 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 RNASEH1O60930 286 aaKnown RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 PROCP04070 461 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 ATG14Q6ZNE5 492 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 GJD3Q8N144 294 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 MREGQ8N565 214 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 H3BQF6 201 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 PCSK2P16519 638 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 VBP1P61758 197 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 RAB26Q9ULW5 256 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 PRPF19Q9UMS4 504 aaKnown RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 COQ6Q9Y2Z9 468 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 ECE2O60344 883 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 DHFRP00374 187 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 DGCR6Q14129 220 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 COMMD2Q86X83 199 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 CLYBLQ8N0X4 340 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 RDH11Q8TC12 318 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 MTG1Q9BT17 334 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-215ENST00000543185 ZNF221Q9UK13 617 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 DCXO43602 365 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 TSHRP16473 764 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 NPY2RP49146 381 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 GLB1LQ6UWU2 654 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 UCMAQ8WVF2 138 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 SSR3Q9UNL2 185 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 LOC110117498-PIK3R3F6TDL0 507 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 CHRNGP07510 517 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 ARPC4P59998 168 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 SAMD3Q8N6K7 520 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 ABCB10Q9NRK6 738 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 ABCC3O15438 1527 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 C19orf81C9J6K1 198 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 MRPS22P82650 360 aaKnown RBP19.69■□□□□ 0.74
HDAC4-215ENST00000543185 SCRN3Q0VDG4 424 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 BTN2A1Q7KYR7 527 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 POC5Q8NA72 575 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 MCUBQ9NWR8 336 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 SRP54P61011 504 aaKnown RBP19.69■□□□□ 0.74
HDAC4-215ENST00000543185 RP9Q8TA86 221 aaKnown RBP19.69■□□□□ 0.74
HDAC4-215ENST00000543185 AP4E1Q9UPM8 1137 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 IDO1P14902 403 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 FGD3Q5JSP0 725 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 C16orf86Q6ZW13 317 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 FAM118BQ9BPY3 351 aa19.69■□□□□ 0.74
HDAC4-215ENST00000543185 ERN1O75460 977 aaKnown RBP19.68■□□□□ 0.74
HDAC4-215ENST00000543185 NAMPTP43490 491 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 NRF1Q16656 503 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 STRIP1Q5VSL9 837 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 TP53INP1Q96A56 240 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 TRPC4Q9UBN4 977 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 POLR1DQ9Y2S0 133 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 MATN2O00339 956 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 AKR1D1P51857 326 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 PAGE2BQ5JRK9 111 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 GALNT18Q6P9A2 607 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 AAGABQ6PD74 315 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 CBWD2Q8IUF1 395 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 HERC6Q8IVU3 1022 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 CCDC3Q9BQI4 270 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 MID1IP1Q9NPA3 183 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 METTL21EPA6NDL7 271 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 LSM1O15116 133 aaKnown RBP19.68■□□□□ 0.74
HDAC4-215ENST00000543185 SGTAO43765 313 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 RBM20Q5T481 1227 aaKnown RBP19.68■□□□□ 0.74
HDAC4-215ENST00000543185 NT5DC1Q5TFE4 455 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 NME5P56597 212 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 CKLFQ9UBR5 152 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 STX16-NPEPL1H3BU86 382 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 STX16O14662 325 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 MLYCDO95822 493 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 PARP6Q2NL67 630 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 KCTD21Q4G0X4 260 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 CDKAL1Q5VV42 579 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 IKZF3Q9UKT9 509 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 CNTNAP5Q8WYK1 1306 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 SERPINA1P01009 418 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 SDC2P34741 201 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 DDX39BQ13838 428 aaKnown RBP19.68■□□□□ 0.74
HDAC4-215ENST00000543185 GLRA4Q5JXX5 417 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 SYTL5Q8TDW5 730 aaPredicted RBP19.68■□□□□ 0.74
HDAC4-215ENST00000543185 DPP3Q9NY33 737 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 GPR162Q16538 588 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 ESRP1Q6NXG1 681 aaKnown RBP19.68■□□□□ 0.74
HDAC4-215ENST00000543185 CCDC167Q9P0B6 97 aa19.68■□□□□ 0.74
HDAC4-215ENST00000543185 ERMARDQ5T6L9 678 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 PANX3Q96QZ0 392 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 VDRP11473 427 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 PRDX5P30044 214 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 PDIA6Q15084 440 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 GIPC3Q8TF64 312 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 M0QYT0 321 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 PRG2P13727 222 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 BCL2L14Q9BZR8 327 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 EPB41L1Q9H4G0 881 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 CCDC166P0CW27 439 aa19.67■□□□□ 0.74
HDAC4-215ENST00000543185 C2orf69Q8N8R5 385 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms