RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 UBALD2Q8IYN6 164 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 MAGEH1Q9H213 219 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 ETNK2Q9NVF9 386 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 RAMP2O60895 175 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 TGM2P21980 687 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 NCBP2-AS2Q69YL0 99 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 CXorf57Q6NSI4 855 aaKnown RBP23.71■■□□□ 1.39
HOMER3-205ENST00000542541 PLD5Q8N7P1 536 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 MAIP1Q8WWC4 291 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 ZNF592Q92610 1267 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 HEBP1Q9NRV9 189 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 NDFIP2Q9NV92 336 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 CLEC4EQ9ULY5 219 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 PIAS3Q9Y6X2 628 aa23.71■■□□□ 1.39
HOMER3-205ENST00000542541 FANCGO15287 622 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 NR2C2P49116 596 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 DYNLT1P63172 113 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 GNA12Q03113 381 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 POLD3Q15054 466 aaPredicted RBP23.7■■□□□ 1.39
HOMER3-205ENST00000542541 PARP15Q460N3 678 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 SLC44A4Q53GD3 710 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 FSCBQ5H9T9 825 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 GRAMD4Q6IC98 578 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 NUDT18Q6ZVK8 323 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 SLC13A5Q86YT5 568 aaPredicted RBP23.7■■□□□ 1.39
HOMER3-205ENST00000542541 KIF18AQ8NI77 898 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 PNKPQ96T60 521 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 NAP1L3Q99457 506 aaPredicted RBP23.7■■□□□ 1.39
HOMER3-205ENST00000542541 SLC27A6Q9Y2P4 619 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 RAD54BQ9Y620 910 aa23.7■■□□□ 1.39
HOMER3-205ENST00000542541 MYO10Q9HD67 2058 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 SPECC1L-ADORA2AF8WAN1 911 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 CTHP32929 405 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 OPRD1P41143 372 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 DMC1Q14565 340 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 RNF219Q5W0B1 726 aaPredicted RBP23.7■■□□□ 1.38
HOMER3-205ENST00000542541 SUGP1Q8IWZ8 645 aaKnown RBP23.7■■□□□ 1.38
HOMER3-205ENST00000542541 RASGEF1CQ8N431 466 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 WFDC5Q8TCV5 224 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 P3H4Q92791 437 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 MUC3BQ9H195 1237 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 ABCB8Q9NUT2 735 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 WNT16Q9UBV4 365 aa23.7■■□□□ 1.38
HOMER3-205ENST00000542541 TTC7AQ9ULT0 858 aaPredicted RBP23.7■■□□□ 1.38
HOMER3-205ENST00000542541 NCAM2O15394 837 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 FGGP02679 453 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 CISD3P0C7P0 127 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 HLA-FP30511 346 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 SLC6A11P48066 632 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 PLK1P53350 603 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 LMAN2Q12907 356 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 C12orf40Q86WS4 652 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 LRRC49Q8IUZ0 686 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.69■■□□□ 1.38
HOMER3-205ENST00000542541 TTC13Q8NBP0 860 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 COG1Q8WTW3 980 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 P2RY13Q9BPV8 354 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 FEM1AQ9BSK4 669 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 KLC2Q9H0B6 622 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 RNF14Q9UBS8 474 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 GGA2Q9UJY4 613 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 HEY1Q9Y5J3 304 aa23.69■■□□□ 1.38
HOMER3-205ENST00000542541 ARHGAP42A6NI28 874 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 APOC4-APOC2K7ER74 178 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 APOC2P02655 101 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 PABPC1P11940 636 aaKnown RBP23.68■■□□□ 1.38
HOMER3-205ENST00000542541 MX2P20592 715 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 SOX9P48436 509 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 ADCY2Q08462 1091 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 LONRF2Q1L5Z9 754 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 AFMIDQ63HM1 303 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 NPWQ8N729 165 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 ACTRT1Q8TDG2 376 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 WFIKKN2Q8TEU8 576 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 CELF6Q96J87 481 aaKnown RBP23.68■■□□□ 1.38
HOMER3-205ENST00000542541 LRRC19Q9H756 370 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 MFHAS1Q9Y4C4 1052 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 A0A0C4DFX4 3053 aa23.68■■□□□ 1.38
HOMER3-205ENST00000542541 RASA4BC9J798 803 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 RASA4O43374 803 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 CD70P32970 193 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 CSKP41240 450 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 KLF1Q13351 362 aaPredicted RBP23.67■■□□□ 1.38
HOMER3-205ENST00000542541 AHI1Q8N157 1196 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 OR52K2Q8NGK3 314 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 ARHGEF2Q92974 986 aaKnown RBP23.67■■□□□ 1.38
HOMER3-205ENST00000542541 LMLNQ96KR4 655 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 HERPUD2Q9BSE4 406 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 SLC39A8Q9C0K1 460 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 NOL6Q9H6R4 1146 aaKnown RBP23.67■■□□□ 1.38
HOMER3-205ENST00000542541 DTLQ9NZJ0 730 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 VPS28Q9UK41 221 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 FBXL21Q9UKT6 434 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 HPCAL4Q9UM19 191 aa23.67■■□□□ 1.38
HOMER3-205ENST00000542541 DOCK4Q8N1I0 1966 aa23.66■■□□□ 1.38
HOMER3-205ENST00000542541 A0A0D9SEW6 157 aa23.66■■□□□ 1.38
HOMER3-205ENST00000542541 PGRMC1O00264 195 aaKnown RBP23.66■■□□□ 1.38
HOMER3-205ENST00000542541 MAN2B1O00754 1011 aa23.66■■□□□ 1.38
HOMER3-205ENST00000542541 MFSD11O43934 449 aa23.66■■□□□ 1.38
HOMER3-205ENST00000542541 GRIA2P42262 883 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms