RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 H7C4K7 107 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 NCAM2O15394 837 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 TYROBPO43914 113 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 VIMP08670 466 aaKnown RBP17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 CLTBP09497 229 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 TPH1P17752 444 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 MX2P20592 715 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 RAP1GAP2Q684P5 730 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC8B1Q6J4K2 584 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 CPLX4Q7Z7G2 160 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 RNF168Q8IYW5 571 aaPredicted RBP17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 STAMBPL1Q96FJ0 436 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 TEKT5Q96M29 485 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 ACTL7BQ9Y614 415 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 NYNRINQ9P2P1 1898 aaKnown RBP17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 TLR5O60602 858 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 MT-CYBP00156 380 aaPredicted RBP17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 DNAJB2P25686 324 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 KIAA1841Q6NSI8 718 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 SPATA17Q96L03 361 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 SMC6Q96SB8 1091 aa17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 TLR8Q9NR97 1041 aaKnown RBP17.66■□□□□ 0.42
TMEM50B-210ENST00000542230 MYO7AQ13402 2215 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 HMX2A2RU54 273 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 ARHGAP42A6NI28 874 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 SDR42E2A6NKP2 422 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 GJB5O95377 273 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 INHBAP08476 426 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 TSHRP16473 764 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CA4P22748 312 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 PRKCHP24723 683 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 PAPOLAP51003 745 aaKnown RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 RASA2Q15283 850 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 ZKSCAN8Q15776 578 aaPredicted RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CERCAMQ5T4B2 595 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 KCTD11Q693B1 232 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 FBXL22Q6P050 247 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 FCRL3Q96P31 734 aaPredicted RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 GBA3Q9H227 469 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 FGFR1OP2Q9NVK5 253 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 FETUBQ9UGM5 382 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 PCDHA11Q9Y5I1 949 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 RAD54BQ9Y620 910 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CCDC78A2IDD5 438 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 SRRM3A6NNA2 597 aaPredicted RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 EBAG9O00559 213 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 RTN3O95197 1032 aaPredicted RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CCNB1P14635 433 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 MICALCLQ6ZW33 695 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 LRRC6Q86X45 466 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 ATPAF2Q8N5M1 289 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 RTL3Q8N8U3 475 aaKnown RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 GSDMBQ8TAX9 411 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CKAP2Q8WWK9 683 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 FERMT1Q9BQL6 677 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CCDC134Q9H6E4 229 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 EIF2B3Q9NR50 452 aaKnown RBP17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 NKIRAS1Q9NYS0 192 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CLIC5Q9NZA1 410 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC17A7Q9P2U7 560 aa17.65■□□□□ 0.42
TMEM50B-210ENST00000542230 CHD9Q3L8U1 2897 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ASMTLO95671 621 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 AP2A1O95782 977 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ZDHHC11BP0C7U3 371 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 STX2P32856 288 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 C1orf53Q5VUE5 145 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 NADSYN1Q6IA69 706 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 KDELC2Q7Z4H8 507 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF689Q96CS4 500 aaPredicted RBP17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 LRRC39Q96DD0 335 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 SEC16BQ96JE7 1060 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 MOCS1Q9NZB8 636 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 PSAT1Q9Y617 370 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 DOCK4Q8N1I0 1966 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 TTC24A2A3L6 582 aaPredicted RBP17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 TRIM49D1C9J1S8 452 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 PYGBP11216 843 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF135P52742 658 aaPredicted RBP17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 CDK16Q00536 496 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 NR1H3Q13133 447 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 SH2D5Q6ZV89 423 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 OTOP2Q7RTS6 562 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 SLC26A11Q86WA9 606 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ARHGAP18Q8N392 663 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ELAC2Q9BQ52 826 aaKnown RBP17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 CATSPERBQ9H7T0 1116 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 ALG13Q9NP73 1137 aaKnown RBP17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 IKBKGQ9Y6K9 419 aa17.64■□□□□ 0.41
TMEM50B-210ENST00000542230 FAM159BA6NKW6 160 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 J3KR12 359 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 SCAMP3O14828 347 aaKnown RBP17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 PRPF4O43172 522 aaKnown RBP eCLIP17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 TOP3BO95985 862 aaKnown RBP17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 SPATA31D3P0C874 917 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 MLNP12872 115 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 SARNPP82979 210 aaKnown RBP17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 CRYMQ14894 314 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 AFMIDQ63HM1 303 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms