RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 FAM43BQ6ZT52 329 aaPredicted RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 TMC7Q7Z402 723 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 CBWD2Q8IUF1 395 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ZNF276Q8N554 614 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 C12orf76Q8N812 135 aaPredicted RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 MCUQ8NE86 351 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 RFWD2Q8NHY2 731 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ACTRT2Q8TDY3 377 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 NAT14Q8WUY8 206 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 CPA5Q8WXQ8 436 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 BSNDQ8WZ55 320 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 SEMA4DQ92854 862 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 TTC17Q96AE7 1141 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 CASD1Q96PB1 797 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 C11orf70Q9BRQ4 267 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 LHX5Q9H2C1 402 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ADAMTS10Q9H324 1103 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 KCNK13Q9HB14 408 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 XAB2Q9HCS7 855 aaKnown RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 KRT82Q9NSB4 513 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 DNAJC17Q9NVM6 304 aaKnown RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 TBCCD1Q9NVR7 557 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ASNSD1Q9NWL6 643 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 DNAJC28Q9NX36 388 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ARHGAP28Q9P2N2 729 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 VPS28Q9UK41 221 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 DMTF1Q9Y222 760 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 USTQ9Y2C2 406 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 TRIP11Q15643 1979 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 CFAP54Q96N23 3096 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 A0A1W2PPM1 405 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 H0Y858 1186 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 GLRA3O75311 464 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 BAG2O95816 211 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 HLA-DRAP01903 254 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 ADRB2P07550 413 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 ZFXP17010 805 aaPredicted RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 LAG3P18627 525 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 CD58P19256 250 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 PRKCHP24723 683 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 GARSP41250 739 aaKnown RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 MAGEA6P43360 314 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 GPX6P59796 221 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 ADCY1Q08828 1119 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 TFDP1Q14186 410 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 DSC3Q14574 896 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 CBX2Q14781 532 aaPredicted RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 PDK2Q15119 407 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 PCBP1Q15365 356 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHFR-219ENST00000541341 CLLU1OSQ5K130 101 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 TEDDM1Q5T9Z0 273 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 KCNT2Q6UVM3 1135 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 C16orf89Q6UX73 402 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 MFSD7Q6UXD7 560 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 MAEAQ7L5Y9 396 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 PRPF39Q86UA1 669 aaKnown RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 HACE1Q8IYU2 909 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 RNF168Q8IYW5 571 aaPredicted RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 AHI1Q8N157 1196 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 MARVELD2Q8N4S9 558 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 FBXL6Q8N531 539 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 TERB1Q8NA31 727 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 ADCY4Q8NFM4 1077 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 RIN3Q8TB24 985 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 CPT1BQ92523 772 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 LPPQ93052 612 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 LRGUKQ96M69 825 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 SRPK1Q96SB4 655 aaKnown RBP10.66□□□□□ -0.7
CHFR-219ENST00000541341 CGRRF1Q99675 332 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 THTPAQ9BU02 230 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 CCDC106Q9BWC9 280 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 C2orf40Q9H1Z8 148 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 TMEM134Q9H6X4 195 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 TMEM161AQ9NX61 479 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 PLA2G4CQ9UP65 541 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 CDY1Q9Y6F8 540 aa10.66□□□□□ -0.7
CHFR-219ENST00000541341 MTCL1Q9Y4B5 1905 aaKnown RBP10.65□□□□□ -0.7
CHFR-219ENST00000541341 A0A087WZ62 844 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 ARHGAP42A6NI28 874 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 SLCO1B7G3V0H7 640 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 CLASP2O75122 1294 aaKnown RBP10.65□□□□□ -0.7
CHFR-219ENST00000541341 C4BPAP04003 597 aaKnown RBP10.65□□□□□ -0.7
CHFR-219ENST00000541341 ASGR2P07307 311 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 VCLP18206 1134 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 MX2P20592 715 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 TGM2P21980 687 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 PHKA2P46019 1235 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 PSMD7P51665 324 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 EFNA5P52803 228 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 NR1H2P55055 460 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 TAS2R40P59535 323 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 YWHAGP61981 247 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHFR-219ENST00000541341 ROR1Q01973 937 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 UBE3AQ05086 875 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 SIGLEC14Q08ET2 396 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 CDC16Q13042 620 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 TMED1Q13445 227 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms