RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 C6orf52Q5T4I8 152 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 SPNS2Q8IVW8 549 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 FAM156AQ8NDB6 213 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 GCOM2Q9BZD3 368 aaPredicted RBP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 DPP3Q9NY33 737 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 ZNF638Q14966 1978 aaKnown RBP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 KCNK1O00180 336 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 CASQ2O14958 399 aaPredicted RBP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 CRTAMO95727 393 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 P4HA1P13674 534 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 ALOX15P16050 662 aaPredicted RBP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 ADORA2BP29275 332 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 DPYSL2Q16555 572 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 NADK2Q4G0N4 442 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 SDCCAG8Q86SQ7 713 aaPredicted RBP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 OR52K1Q8NGK4 314 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 FAM81AQ8TBF8 368 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 PRICKLE1Q96MT3 831 aaPredicted RBP20.76■□□□□ 0.91
TMEM260-203ENST00000539559 TBCBQ99426 244 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 PCDHB12Q9Y5F1 795 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 HNRNPRO43390 633 aaKnown RBP20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PGAM1P18669 254 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PITX1P78337 314 aaPredicted RBP20.75■□□□□ 0.91
TMEM260-203ENST00000539559 MS4A2Q01362 244 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 ITGA7Q13683 1181 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 STXBP5Q5T5C0 1151 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 MAP3K21Q5TCX8 1036 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 LRRC8BQ6P9F7 803 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 STRA8Q7Z7C7 330 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 LILRA2Q8N149 483 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 P2RY11Q96G91 374 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 KCNK16Q96T55 309 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PDZD7Q9H5P4 517 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PREBQ9HCU5 417 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 SCN1AP35498 2009 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 A0A0G2JMZ2 1700 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 CREB3O43889 395 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 CLPTM1O96005 669 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 VTNP04004 478 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 ENO3P13929 434 aaPredicted RBP20.75■□□□□ 0.91
TMEM260-203ENST00000539559 MX2P20592 715 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PIK3R1P27986 724 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 USP46P62068 366 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 INCA1Q0VD86 236 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PPP2R5DQ14738 602 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 ZNF669Q96BR6 464 aaPredicted RBP20.75■□□□□ 0.91
TMEM260-203ENST00000539559 CERS2Q96G23 380 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PHF12Q96QT6 1004 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 UNKQ9C0B0 810 aaKnown RBP20.75■□□□□ 0.91
TMEM260-203ENST00000539559 TCF7L2Q9NQB0 619 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 PSMD13Q9UNM6 376 aa20.75■□□□□ 0.91
TMEM260-203ENST00000539559 G3V2L1 256 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 PDGFRBP09619 1106 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 PIM1P11309 404 aaPredicted RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 CCDC130P13994 396 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 PABPC1LQ4VXU2 614 aaKnown RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 FSTL4Q6MZW2 842 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 SLC35F5Q8WV83 523 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 RCN3Q96D15 328 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 KIF12Q96FN5 646 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 PRPF18Q99633 342 aaKnown RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 APOL2Q9BQE5 337 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 MORF4L1Q9UBU8 362 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 AP4B1Q9Y6B7 739 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 SLC25A27O95847 323 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 JUNP05412 331 aaKnown RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 ARF4P18085 180 aaPredicted RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 CDKL1Q00532 357 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 FLOT2Q14254 428 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 KLHDC10Q6PID8 442 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 FASTKD5Q7L8L6 764 aaKnown RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 PTAR1Q7Z6K3 402 aaPredicted RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 DSELQ8IZU8 1212 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 FAM167AQ96KS9 214 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 SPATA33Q96N06 139 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 RTKNQ9BST9 563 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 GATA5Q9BWX5 397 aaPredicted RBP20.74■□□□□ 0.91
TMEM260-203ENST00000539559 SLC4A5Q9BY07 1137 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 NUF2Q9BZD4 464 aa20.74■□□□□ 0.91
TMEM260-203ENST00000539559 A0A096LPK6 155 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 TRPA1O75762 1119 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 GP5P40197 560 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 DPP6P42658 865 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 GLRBP48167 497 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 MYBPC1Q00872 1141 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 FSCBQ5H9T9 825 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 OLFML2BQ68BL8 750 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 CATSPER2Q96P56 530 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 GLTPD2A6NH11 291 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 ASLP04424 464 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 EDNRBP24530 442 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 ATICP31939 592 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 XIAPP98170 497 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 MYLK3Q32MK0 819 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 PKDCCQ504Y2 493 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 HSP90AA5PQ58FG0 334 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 GJC2Q5T442 439 aaPredicted RBP20.73■□□□□ 0.91
TMEM260-203ENST00000539559 TMEM110Q86TL2 294 aa20.73■□□□□ 0.91
TMEM260-203ENST00000539559 FBXO16Q8IX29 292 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms