RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CYB5D2	Q8WUJ1	264 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RXFP2	Q8WXD0	754 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RLN3	Q8WXF3	142 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SORCS1	Q8WY21	1168 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DNASE2B	Q8WZ79	361 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	IGSF8	Q969P0	613 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CFAP57	Q96MR6	1250 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	EIF3C	Q99613	913 aa	Known RBP	12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	NCAPG	Q9BPX3	1015 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FEM1A	Q9BSK4	669 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SUSD2	Q9UGT4	822 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	VANGL2	Q9ULK5	521 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	OR51B4	Q9Y5P0	310 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CHD5	Q8TDI0	1954 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	EDDM13	A0A1B0GTR0	161 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ILVBL	A1L0T0	632 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828		I6L893	689 aa	Predicted RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ALOX15B	O15296	676 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ATP9B	O43861	1147 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RNASEH1	O60930	286 aa	Known RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	NDUFS2	O75306	463 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	GPD1	P21695	349 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	HTR7	P34969	479 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RFC1	P35251	1148 aa	Predicted RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ETFB	P38117	255 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TPMT	P51580	245 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CLCN6	P51797	869 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	KRT83	P78385	493 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZBED6	P86452	979 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RPL6	Q02878	288 aa	Known RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CREB5	Q02930	508 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF33A	Q06730	810 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SLC20A2	Q08357	652 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ASIC2	Q16515	512 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TTC31	Q49AM3	519 aa	Predicted RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C2CD6	Q53TS8	623 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PPP1R15B	Q5SWA1	713 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SYCP2L	Q5T4T6	812 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ARTN	Q5T4W7	220 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C6orf118	Q5T5N4	469 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MANEAL	Q5VSG8	457 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RNF219	Q5W0B1	726 aa	Predicted RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF776	Q68DI1	518 aa	Predicted RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PLEKHA7	Q6IQ23	1121 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SLC23A3	Q6PIS1	610 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	WDR59	Q6PJI9	974 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RMDN1	Q96DB5	314 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TRIM11	Q96F44	468 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SIK2	Q9H0K1	926 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ANLN	Q9NQW6	1124 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PARVA	Q9NVD7	372 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DONSON	Q9NYP3	566 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	COX16	Q9P0S2	106 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PILRB	Q9UKJ0	227 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CDV3	Q9UKY7	258 aa	Known RBP	12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CAPN11	Q9UMQ6	739 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828	HS3ST2	Q9Y278	367 aa		12.66	□□□□□ -0.38
CLTCL1-205	ENST00000538828		E9PAM4	449 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	KHNYN	O15037	678 aa	Known RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MYBL1	P10243	752 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MAPKAPK2	P49137	400 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DHPS	P49366	369 aa	Predicted RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	KLHL30	Q0D2K2	578 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ELAVL3	Q14576	367 aa	Known RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DUOXA1	Q1HG43	343 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	WDR45B	Q5MNZ6	344 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C9orf64	Q5T6V5	341 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DNAJC24	Q6P3W2	148 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C14orf80	Q86SX3	495 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FAM131B	Q86XD5	332 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DRC7	Q8IY82	874 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	APCDD1	Q8J025	514 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	EMC1	Q8N766	993 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DCAF4L2	Q8NA75	395 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	JOSD2	Q8TAC2	188 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CNPY3	Q9BT09	278 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZYG11B	Q9C0D3	744 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	HAUS4	Q9H6D7	363 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SGK2	Q9HBY8	427 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	OSGEP	Q9NPF4	335 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SEPT11	Q9NVA2	429 aa	Known RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF212	Q9UDV6	495 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ADAMTS1	Q9UHI8	967 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CYP8B1	Q9UNU6	501 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	INVS	Q9Y283	1065 aa		12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.65	□□□□□ -0.38
CLTCL1-205	ENST00000538828	LAMA1	P25391	3075 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	METTL12	A8MUP2	240 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	CBFA2T2	O43439	604 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	RTN2	O75298	545 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	DNTT	P04053	509 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	SERPINF2	P08697	491 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	HLA-E	P13747	358 aa		12.64	□□□□□ -0.39
CLTCL1-205	ENST00000538828	MZF1	P28698	734 aa	Predicted RBP	12.64	□□□□□ -0.39

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