RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ELAVL3Q14576 367 aaKnown RBP11.53□□□□□ -0.56
CLPB-208ENST00000538021 RABEP1Q15276 862 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 CDKN3Q16667 212 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
CLPB-208ENST00000538021 FSCBQ5H9T9 825 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 PM20D1Q6GTS8 502 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 USP53Q70EK8 1073 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 BHLHA9Q7RTU4 235 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 KLK6Q92876 244 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 PTPRN2Q92932 1015 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 EXTL1Q92935 676 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 PRR11Q96HE9 360 aaPredicted RBP11.53□□□□□ -0.56
CLPB-208ENST00000538021 C7orf25Q9BPX7 421 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 BLZF1Q9H2G9 400 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 KDM4CQ9H3R0 1056 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 MMRN2Q9H8L6 949 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 NLGN3Q9NZ94 848 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 SEPT3Q9UH03 358 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 PCDHGA8Q9Y5G5 932 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 ENTPD2Q9Y5L3 495 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 DOCK9Q9BZ29 2069 aa11.53□□□□□ -0.56
CLPB-208ENST00000538021 LY6G6EA0A0G2JKS1 128 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 CPED1A4D0V7 1026 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 YJEFN3A6XGL0 299 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 CDRT15L2A8MXV6 281 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 E7ENQ6 273 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 TULP2O00295 520 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 IKBKBO14920 756 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 EFSO43281 561 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 ACSL4O60488 711 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 GJB6O95452 261 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 AFPP02771 609 aaKnown RBP11.52□□□□□ -0.57
CLPB-208ENST00000538021 GP1BBP13224 206 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 VAV1P15498 845 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 NNMTP40261 264 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 STK19P49842 368 aaPredicted RBP11.52□□□□□ -0.57
CLPB-208ENST00000538021 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 UBAP2LQ14157 1087 aaKnown RBP11.52□□□□□ -0.57
CLPB-208ENST00000538021 E2F4Q16254 413 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 ZNF542PQ5EBM4 170 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 NUGGCQ68CJ6 796 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 CRTC1Q6UUV9 634 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 TRIM69Q86WT6 500 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 UNC45BQ8IWX7 931 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 CFAP52Q8N1V2 620 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 ANKRD52Q8NB46 1076 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 TAS1R2Q8TE23 839 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 TATDN2Q93075 761 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 SGF29Q96ES7 293 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 PRICKLE1Q96MT3 831 aaPredicted RBP11.52□□□□□ -0.57
CLPB-208ENST00000538021 USP28Q96RU2 1077 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 BACH2Q9BYV9 841 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
CLPB-208ENST00000538021 CUEDC2Q9H467 287 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 ABCC13Q9NSE7 274 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 U3KQA8 63 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 ITIH6Q6UXX5 1313 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 UNC79Q9P2D8 2635 aa11.52□□□□□ -0.57
CLPB-208ENST00000538021 K7ESM1 405 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 SCAMP1O15126 338 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 SLC7A4O43246 635 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 RNGTTO60942 597 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 LUC7L3O95232 432 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 FAM87AP0C7U9 286 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 PRLRP16471 622 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 ITGB6P18564 788 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 GCLMP48507 274 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 TBX4P57082 545 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 TLE1Q04724 770 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 CNTN1Q12860 1018 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 SLC39A14Q15043 492 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 GOLGA7BQ2TAP0 167 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 FAM46CQ5VWP2 391 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 NADSYN1Q6IA69 706 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 CNNM4Q6P4Q7 775 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 RBM44Q6ZP01 1051 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 EFL1Q7Z2Z2 1120 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 APCDD1Q8J025 514 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 SIX6OS1Q8N1H7 587 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 SLC4A11Q8NBS3 891 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 WDR36Q8NI36 951 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 TMC2Q8TDI7 906 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 MYEOVQ96EZ4 313 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 SPAG5Q96R06 1193 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 DDX50Q9BQ39 737 aaKnown RBP11.51□□□□□ -0.57
CLPB-208ENST00000538021 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 DMAC2Q9NW81 257 aa11.51□□□□□ -0.57
CLPB-208ENST00000538021 DNAJC28Q9NX36 388 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms