RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 B8ZZF3 427 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 TMEM232C9JQI7 657 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 POC1B-GALNT4F8VUJ3 575 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 HBP1O60381 514 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 SOX10P56693 466 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 FOXD4Q12950 439 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 IL13RA2Q14627 380 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 MZT2BQ6NZ67 158 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 SLC30A9Q6PML9 568 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 ATF7IPQ6VMQ6 1270 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 Q6ZPA2 131 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 H1FNTQ75WM6 255 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 CPLX4Q7Z7G2 160 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 ARHGEF25Q86VW2 580 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 RHPN2Q8IUC4 686 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 ZNF366Q8N895 744 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 ZCCHC10Q8TBK6 192 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 KCNG4Q8TDN1 519 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 CNOT9Q92600 299 aaKnown RBP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 PIGKQ92643 395 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 ATP2A3Q93084 1043 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 TIMP4Q99727 224 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 BARD1Q99728 777 aaKnown RBP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 NPLQ9BXD5 320 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 TTC12Q9H892 705 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-208ENST00000536710 PLEKHA5Q9HAU0 1116 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 SLC22A11Q9NSA0 550 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 SLC8A2Q9UPR5 921 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 SCINQ9Y6U3 715 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 DYTNA2CJ06 578 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 PRSS47A8MTI9 375 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 FOXN1O15353 648 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 STRNO43815 780 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 RAMP2O60895 175 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 RNF8O76064 485 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 F9P00740 461 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 LDHCP07864 332 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 AKR1A1P14550 325 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 KRT4P19013 534 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 CD72P21854 359 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 IDUAP35475 653 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 HARS2P49590 506 aaKnown RBP5.87□□□□□ -1.47
PRKDC-208ENST00000536710 ADPRHP54922 357 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 MTA1Q13330 715 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 UBAP2Q5T6F2 1119 aaKnown RBP5.87□□□□□ -1.47
PRKDC-208ENST00000536710 MDGA2Q7Z553 956 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 TFAP2DQ7Z6R9 452 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 MON1AQ86VX9 555 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 RFX6Q8HWS3 928 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 TNIP2Q8NFZ5 429 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 CENPIQ92674 756 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-208ENST00000536710 ZNF347Q96SE7 839 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 CHCHD6Q9BRQ6 235 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 CADM1Q9BY67 442 aaKnown RBP5.87□□□□□ -1.47
PRKDC-208ENST00000536710 TBC1D22BQ9NU19 505 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 BEX4Q9NWD9 120 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-208ENST00000536710 FBXO4Q9UKT5 387 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 NAALADL1Q9UQQ1 740 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 MYRFQ9Y2G1 1151 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 LAS1LQ9Y4W2 734 aaKnown RBP5.87□□□□□ -1.47
PRKDC-208ENST00000536710 EMSYQ7Z589 1322 aa5.87□□□□□ -1.47
PRKDC-208ENST00000536710 A0A087X1B8 175 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 PGPEP1LA6NFU8 196 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 PER2O15055 1255 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 FZD7O75084 574 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 RNASEH2AO75792 299 aaKnown RBP5.86□□□□□ -1.47
PRKDC-208ENST00000536710 DDX58O95786 925 aaKnown RBP5.86□□□□□ -1.47
PRKDC-208ENST00000536710 CHRM5P08912 532 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-208ENST00000536710 C6P13671 934 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 ST6GAL1P15907 406 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 TACR2P21452 398 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 TACR3P29371 465 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 TYK2P29597 1187 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 POLD2P49005 469 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 DCAF7P61962 342 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 PDE1CQ14123 709 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-208ENST00000536710 TMEM119Q4V9L6 283 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 SLC45A4Q5BKX6 768 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 SUMO4Q6EEV6 95 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 ITPRIPL1Q6GPH6 555 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 CHSY1Q86X52 802 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 GHDCQ8N2G8 530 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 ANKRD52Q8NB46 1076 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 NFKBIDQ8NI38 313 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 FAM110DQ8TAY7 271 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-208ENST00000536710 KAT2BQ92831 832 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 RITA1Q96K30 269 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 LMAN2LQ9H0V9 348 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 PRDM13Q9H4Q3 707 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 SLC32A1Q9H598 525 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 EPHX3Q9H6B9 360 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 PPP1R14DQ9NXH3 145 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 SERGEFQ9UGK8 458 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 DHDHQ9UQ10 334 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 OSGIN2Q9Y236 505 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 TNFSF13BQ9Y275 285 aa5.86□□□□□ -1.47
PRKDC-208ENST00000536710 SPATA31A5Q5VU36 1347 aa5.85□□□□□ -1.47
PRKDC-208ENST00000536710 SPATA31A6Q5VVP1 1343 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms