RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SETD3Q86TU7 594 aaPredicted RBP11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 KATNAL2Q8IYT4 538 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 OR5B17Q8NGF7 314 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 BTN2A3PQ96KV6 586 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 FZD8Q9H461 694 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 ZDHHC6Q9H6R6 413 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 ARHGAP20Q9P2F6 1191 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 DCDC2Q9UHG0 476 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 CCDC195A0A1B0GUA6 201 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 LRRC10BA6NIK2 292 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 BAIAP3O94812 1187 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 ENO1P06733 434 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 LBX1P52954 281 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 GLMNQ92990 594 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 DZANK1Q9NVP4 752 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 TRPC5OSA6NMA1 111 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 IL10P22301 178 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 PIK3CGP48736 1102 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 C2CD6Q53TS8 623 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF618Q5T7W0 954 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 LRRC8EQ6NSJ5 796 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 LCLAT1Q6UWP7 414 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 KDM7AQ6ZMT4 941 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 GLT6D1Q7Z4J2 308 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 RBM12Q9NTZ6 932 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 PCMTD2Q9NV79 361 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 CFAP97Q9P2B7 532 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
AMBRA1-211ENST00000533727 TISP43B9A030 160 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 AMPD1P23109 780 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 CCND3P30281 292 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZDHHC20Q5W0Z9 365 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 SCARA3Q6AZY7 606 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 STRADAQ7RTN6 431 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF655Q8N720 491 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 PHC3Q8NDX5 983 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 OR9Q1Q8NGQ5 310 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 L1RE1Q9UN81 338 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 RAD51CO43502 376 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 WARSP23381 471 aaKnown RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 KCNJ1P48048 391 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 C21orf59P57076 290 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 KRT72Q14CN4 511 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 DDR2Q16832 855 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 FAM183BPQ6ZVS7 135 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 OTOP3Q7RTS5 596 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ADAM32Q8TC27 787 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 MCOLN3Q8TDD5 553 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 LENG1Q96BZ8 264 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 TBL1YQ9BQ87 522 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF670Q9BS34 389 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZFP14Q9HCL3 533 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 SLC20A2Q08357 652 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 PARP6Q2NL67 630 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF697Q5TEC3 545 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 PDPK2PQ6A1A2 396 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 LRRC8BQ6P9F7 803 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 POLNQ7Z5Q5 900 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 PCYOX1LQ8NBM8 494 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 OR2W6PQ8NHA6 318 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 NTPCRQ9BSD7 190 aaKnown RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 KCTD10Q9H3F6 313 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 TUBGCP4Q9UGJ1 667 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 EIF3LQ9Y262 564 aaKnown RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 PSMD12O00232 456 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ACRP10323 421 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 PBLDP30039 288 aaPredicted RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 CD151P48509 253 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 TAF10Q12962 218 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 MPP3Q13368 585 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 FAM187BQ17R55 369 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZCWPW2Q504Y3 356 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 SYCP2LQ5T4T6 812 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 CACHD1Q5VU97 1274 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 WFIKKN2Q8TEU8 576 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF384Q8TF68 577 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 REPS1Q96D71 796 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 LRRC39Q96DD0 335 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 AASDHPPTQ9NRN7 309 aa11.48□□□□□ -0.57
AMBRA1-211ENST00000533727 FAM47E-STBD1D6RA91 191 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 RNF103O00237 685 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 C8AP07357 584 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SERPINB1P30740 379 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 GAD2Q05329 585 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 ANKS6Q68DC2 871 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms