RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SLCO3A1Q9UIG8 710 aa14.34□□□□□ -0.11
TSPAN4-220ENST00000532375 ERVW-1Q9UQF0 538 aa14.34□□□□□ -0.11
TSPAN4-220ENST00000532375 SCINQ9Y6U3 715 aa14.34□□□□□ -0.11
TSPAN4-220ENST00000532375 EP300Q09472 2414 aaPredicted RBP14.34□□□□□ -0.11
TSPAN4-220ENST00000532375 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 TCRBV21S2A2A0A5A6 115 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 ASLP04424 464 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 ATP5BP06576 529 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 TCF4P15884 667 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 NDUFV2P19404 249 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 FECHP22830 423 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 MIPP30301 263 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 MRE11P49959 708 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNF177Q13360 481 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 CA9Q16790 459 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 MAP7D1Q3KQU3 841 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 SDE2Q6IQ49 451 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 SCYL2Q6P3W7 929 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 LRRC31Q6UY01 552 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 SETD3Q86TU7 594 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 FRMD1Q8N878 549 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNF366Q8N895 744 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 ERLEC1Q96DZ1 483 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 BTBD6Q96KE9 485 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 MRGPRX1Q96LB2 322 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 TPSD1Q9BZJ3 242 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 ZYG11BQ9C0D3 744 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 SLC6A17Q9H1V8 727 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 PTPRZ1P23471 2315 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 GON4LQ3T8J9 2241 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 THADAQ6YHU6 1953 aa14.33□□□□□ -0.12
TSPAN4-220ENST00000532375 A0A0D9SEW6 157 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 DCLK1O15075 740 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 LMNAP02545 664 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 TPM1P09493 284 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 IL1R2P27930 398 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 P2RY2P41231 377 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 NUMBP49757 651 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 AIF1P55008 147 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 OXCT1P55809 520 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 ECT2LQ008S8 904 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 ACAP1Q15027 740 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 E2F5Q15329 346 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 RNF219Q5W0B1 726 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 SERPINA13PQ6UXR4 307 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 ALYREFQ86V81 257 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 CPNE8Q86YQ8 564 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 CCDC117Q8IWD4 279 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 NIPA2Q8N8Q9 360 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 HMGB4Q8WW32 186 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 ZC3H10Q96K80 434 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 NUP85Q9BW27 656 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 RETREG1Q9H6L5 497 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 NOL6Q9H6R4 1146 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 CD93Q9NPY3 652 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 PRSS16Q9NQE7 514 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 SPTLC3Q9NUV7 552 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 ZNHIT6Q9NWK9 470 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 GPATCH2LQ9NWQ4 482 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 MBD1Q9UIS9 605 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 PLA2G4CQ9UP65 541 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 INVSQ9Y283 1065 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 WDR87Q6ZQQ6 2873 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 FRYLO94915 3013 aa14.32□□□□□ -0.12
TSPAN4-220ENST00000532375 CEP192Q8TEP8 1941 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 ILVBLA1L0T0 632 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 AKR1B10O60218 316 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 RPP40O75818 363 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 ZMPSTE24O75844 475 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 ALDH1A2O94788 518 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 LCA5LO95447 670 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 EPHX1P07099 455 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 SRPRAP08240 638 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 H2AFZP0C0S5 128 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 RHOQP17081 205 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 BCKDHBP21953 392 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 PCK1P35558 622 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 STK19P49842 368 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 SIM2Q14190 667 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 NUMA1Q14980 2115 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 HNRNPA1L2Q32P51 320 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 FNDC3BQ53EP0 1204 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 C9orf64Q5T6V5 341 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 TXNRD3NBQ6F5E7 133 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 H2AFVQ71UI9 128 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 KBTBD6Q86V97 674 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 OR7D4Q8NG98 312 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 FRS2Q8WU20 508 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 RLN3Q8WXF3 142 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 PTPRN2Q92932 1015 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 CCDC42Q96M95 316 aa14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 SNRNP25Q9BV90 132 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-220ENST00000532375 ACE2Q9BYF1 805 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms