RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 NADSYN1Q6IA69 706 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 PMF1Q6P1K2 205 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 ERICH1Q86X53 443 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 DCBLD1Q8N8Z6 715 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 CLEC4CQ8WTT0 213 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 PTPRN2Q92932 1015 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 FAM149B1Q96BN6 582 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 NUCKS1Q9H1E3 243 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 ERVMER34-1Q9H9K5 563 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 TJP2Q9UDY2 1190 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 NAALADL1Q9UQQ1 740 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 PCDHB4Q9Y5E5 795 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 TDRD6O60522 2096 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 TENM4Q6N022 2769 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 MGAQ8IWI9 3026 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 SYNJ2BP-COX16A0A087WUM0 186 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CYSRT1A8MQ03 144 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 M0QYV0 167 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CALCAP01258 141 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 LTFP02788 710 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 SETSIPP0DME0 302 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 ZSCAN22P10073 491 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 PFKFB1P16118 471 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 PDGFRAP16234 1089 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 PRLRP16471 622 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 MZF1P28698 734 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 RBMS1P29558 406 aaKnown RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 METAP1P53582 386 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 RHDQ02161 417 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 DNM1Q05193 864 aaKnown RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 PROX2Q3B8N5 592 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 MS4A13Q5J8X5 152 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 FAM46CQ5VWP2 391 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 TMEM270Q6UE05 265 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CHSY1Q86X52 802 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 LSMEM2Q8N112 164 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 SLC25A45Q8N413 288 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 TMEM174Q8WUU8 243 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 KCNE4Q8WWG9 221 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 KCTD13Q8WZ19 329 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 OR8D1Q8WZ84 308 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 RNF34Q969K3 372 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 AZIN2Q96A70 460 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 LMLNQ96KR4 655 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 PRICKLE1Q96MT3 831 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF578Q96N58 590 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CALN1Q9BXU9 219 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 SEMA4CQ9C0C4 833 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CAAP1Q9H8G2 361 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 UCKL1Q9NWZ5 548 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 COX16Q9P0S2 106 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CYTH4Q9UIA0 394 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 XPO7Q9UIA9 1087 aaKnown RBP9.54□□□□□ -0.88
NEDD8-206ENST00000531430 KIAA1257Q9ULG3 409 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 CFAP46Q8IYW2 2715 aa9.54□□□□□ -0.88
NEDD8-206ENST00000531430 MUC22E2RYF6 1773 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CPED1A4D0V7 1026 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 B8ZZF3 427 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 PRAMEF26H0Y7S4 382 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SLC28A2O43868 658 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 OPA1O60313 960 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 RNGTTO60942 597 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CSO75390 466 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 PCDH8O95206 1070 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 F13A1P00488 732 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 APOEP02649 317 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 THEGLP0DJG4 465 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 ALPPL2P10696 532 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 TACR2P21452 398 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 DGKAP23743 735 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 BRD2P25440 801 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SYKP43405 635 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CNTN1Q12860 1018 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 ELAVL3Q14576 367 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CBWD6Q4V339 395 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SETMARQ53H47 684 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 ZC3H12AQ5D1E8 599 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CBWD3Q5JTY5 395 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CBWD5Q5RIA9 395 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SFMBT2Q5VUG0 894 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 KIAA1614Q5VZ46 1190 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 MSANTD2Q6P1R3 559 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CIR1Q86X95 450 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 KDM1BQ8NB78 822 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 MAPK15Q8TD08 544 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 DQX1Q8TE96 717 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 IRGQQ8WZA9 623 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 TFAP2BQ92481 460 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 FAXDC2Q96IV6 333 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 VCPIP1Q96JH7 1222 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 FCRL2Q96LA5 508 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SERPINB11Q96P15 392 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms