RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 DRGXA6NNA5 263 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 MEI4A8MW99 385 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 TEX33O43247 280 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 SERPINF2P08697 491 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 KRT3P12035 628 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 GNSP15586 552 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 RPS14P62263 151 aaKnown RBP21.22■□□□□ 0.99
VPS28-206ENST00000526734 SKOR2Q2VWA4 1001 aaPredicted RBP21.22■□□□□ 0.99
VPS28-206ENST00000526734 DAB2IPQ5VWQ8 1189 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 TRNP1Q6NT89 227 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 LRSAM1Q6UWE0 723 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 USP30Q70CQ3 517 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 SETD3Q86TU7 594 aaPredicted RBP21.22■□□□□ 0.99
VPS28-206ENST00000526734 SELENOOQ9BVL4 669 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 RETREG1Q9H6L5 497 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 TMEM9BQ9NQ34 198 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 RXFP3Q9NSD7 469 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 SEPT11Q9NVA2 429 aaKnown RBP21.22■□□□□ 0.99
VPS28-206ENST00000526734 SLC25A13Q9UJS0 675 aa21.22■□□□□ 0.99
VPS28-206ENST00000526734 NUP205Q92621 2012 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 TNRC6BQ9UPQ9 1833 aaKnown RBP21.21■□□□□ 0.99
VPS28-206ENST00000526734 IGLV3-10A0A075B6K4 115 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 ANKRD62A6NC57 917 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 C2CD4BA6NLJ0 364 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 SERPINC1P01008 464 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 MON1BQ7L1V2 547 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 ZNF683Q8IZ20 524 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 EMC1Q8N766 993 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 RXFP2Q8WXD0 754 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 DNASE2BQ8WZ79 361 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 BAP1Q92560 729 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 FEM1AQ9BSK4 669 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 GPR174Q9BXC1 333 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 TMEM74BQ9NUR3 256 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 NCKAP1Q9Y2A7 1128 aa21.21■□□□□ 0.99
VPS28-206ENST00000526734 ATXN2Q99700 1313 aaKnown RBP21.21■□□□□ 0.99
VPS28-206ENST00000526734 METTL12A8MUP2 240 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 PATE3B3GLJ2 98 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 SIN3BO75182 1162 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 CFIP05156 583 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 RHOCP08134 193 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 DESP17661 470 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 MZF1P28698 734 aaPredicted RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 GGCXP38435 758 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 CTSOP43234 321 aaPredicted RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 KRT83P78385 493 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 IRX4P78413 519 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 ATP11AP98196 1134 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 NRG1Q02297 640 aaPredicted RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 GFPT1Q06210 699 aaPredicted RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 ELAVL3Q14576 367 aaKnown RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 FIGNQ5HY92 759 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 C6orf118Q5T5N4 469 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 C9orf64Q5T6V5 341 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 ZNF783Q6ZMS7 281 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 C14orf80Q86SX3 495 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 FAM131BQ86XD5 332 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 CACUL1Q86Y37 369 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 RGL4Q8IZJ4 473 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 DEFB119Q8N690 84 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 ALG14Q96F25 216 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 VCPIP1Q96JH7 1222 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 C2orf49Q9BVC5 232 aaPredicted RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 BTBD1Q9H0C5 482 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 PABPC3Q9H361 631 aaKnown RBP21.2■□□□□ 0.98
VPS28-206ENST00000526734 SGK2Q9HBY8 427 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 ANLNQ9NQW6 1124 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 VPS28Q9UK41 221 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 OR51B4Q9Y5P0 310 aa21.2■□□□□ 0.98
VPS28-206ENST00000526734 DCDC2BA2VCK2 349 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 TTC34A8MYJ7 566 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 E9PAM4 449 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 I6L893 689 aaPredicted RBP21.19■□□□□ 0.98
VPS28-206ENST00000526734 TM4SF5O14894 197 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 CCDC14Q49A88 953 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 ACAD10Q6JQN1 1059 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 DNAJC24Q6P3W2 148 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 IRF2BP2Q7Z5L9 587 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 DSG4Q86SJ6 1040 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 CENPIQ92674 756 aaPredicted RBP21.19■□□□□ 0.98
VPS28-206ENST00000526734 IQCDQ96DY2 449 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 MUC3BQ9H195 1237 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 CBX8Q9HC52 389 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 CAPN10Q9HC96 672 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 PPARGC1AQ9UBK2 798 aaKnown RBP21.19■□□□□ 0.98
VPS28-206ENST00000526734 SLCO3A1Q9UIG8 710 aa21.19■□□□□ 0.98
VPS28-206ENST00000526734 FAM170AA1A519 330 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 LRRC53A6NM62 1247 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 SIGLEC16A6NMB1 481 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 GOLGA6L19H0YKK7 550 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ATP9BO43861 1147 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ADH1BP00325 375 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 SYPP08247 313 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ENGP17813 658 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 TNFAIP3P21580 790 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 GPD1P21695 349 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 IRAK1P51617 712 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ATXN3P54252 364 aaPredicted RBP21.18■□□□□ 0.98
VPS28-206ENST00000526734 CST6Q15828 149 aa21.18■□□□□ 0.98
VPS28-206ENST00000526734 ASIC2Q16515 512 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms