RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 CETN2P41208 172 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 PLK1P53350 603 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 YBEYP58557 167 aaPredicted RBP19.22■□□□□ 0.67
PTPRK-218ENST00000525459 COPS2P61201 443 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 SULT2A1Q06520 285 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 LMAN2Q12907 356 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 CCINQ13939 588 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 UBXN2BQ14CS0 331 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 FSTL4Q6MZW2 842 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 WFDC5Q8TCV5 224 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 FAF2Q96CS3 445 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 CLEC4EQ9ULY5 219 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 STARD13Q9Y3M8 1113 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 MYO18AQ92614 2054 aaKnown RBP19.21■□□□□ 0.67
PTPRK-218ENST00000525459 CXorf51AA0A1B0GTR3 108 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 KIF5CO60282 957 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 ZRANB2O95218 330 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTPRK-218ENST00000525459 ASLP04424 464 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 TNNT1P13805 278 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 ERCC2P18074 760 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 RWDD2BP57060 319 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 PLEKHG6Q3KR16 790 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 HSF5Q4G112 596 aaPredicted RBP19.21■□□□□ 0.67
PTPRK-218ENST00000525459 ATP13A4Q4VNC1 1196 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 TMCO3Q6UWJ1 677 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 BMP8AQ7Z5Y6 402 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 RCOR2Q8IZ40 523 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 UMODL1-AS1Q8N2C9 162 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 C2orf49Q9BVC5 232 aaPredicted RBP19.21■□□□□ 0.67
PTPRK-218ENST00000525459 MUC3BQ9H195 1237 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 MAGEH1Q9H213 219 aa19.21■□□□□ 0.67
PTPRK-218ENST00000525459 NDRG2Q9UN36 371 aaKnown RBP19.21■□□□□ 0.67
PTPRK-218ENST00000525459 STK25O00506 426 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 RAMP2O60895 175 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 ATP5BP06576 529 aaKnown RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 TARSP26639 723 aaKnown RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 RPS9P46781 194 aaKnown RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 NDST2P52849 883 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 PARP15Q460N3 678 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 FSCBQ5H9T9 825 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 TRMT11Q7Z4G4 463 aaKnown RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 ZNF687Q8N1G0 1237 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 DCAF4L2Q8NA75 395 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 ACDQ96AP0 544 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 HES6Q96HZ4 224 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 LMLNQ96KR4 655 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 FTCDO95954 541 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 POLR2EP19388 210 aaKnown RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 CD72P21854 359 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 CD70P32970 193 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 CSKP41240 450 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 GNA12Q03113 381 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 PPP2R5EQ16537 467 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 GEN1Q17RS7 908 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 ANKRD20A8PQ5CZ79 823 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 TFDP3Q5H9I0 405 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 PITRM1Q5JRX3 1037 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 NAIF1Q69YI7 327 aaPredicted RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 ASTLQ6HA08 431 aaPredicted RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 RAPGEF5Q92565 580 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 KLHL11Q9NVR0 708 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 TRMT1Q9NXH9 659 aaKnown RBP19.2■□□□□ 0.66
PTPRK-218ENST00000525459 DNAI1Q9UI46 699 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 VPS28Q9UK41 221 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 SIT1Q9Y3P8 196 aa19.2■□□□□ 0.66
PTPRK-218ENST00000525459 FAM170BA6NMN3 283 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 DCLK1O15075 740 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 EGFP01133 1207 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 CD48P09326 243 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 CHRNB1P11230 501 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 ZFXP17010 805 aaPredicted RBP19.19■□□□□ 0.66
PTPRK-218ENST00000525459 CLCN5P51795 746 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 MRPS21P82921 87 aaKnown RBP19.19■□□□□ 0.66
PTPRK-218ENST00000525459 FUT11Q495W5 492 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 RNF219Q5W0B1 726 aaPredicted RBP19.19■□□□□ 0.66
PTPRK-218ENST00000525459 CCDC50Q8IVM0 306 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 FLCNQ8NFG4 579 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 KRT35Q92764 455 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 TTC17Q96AE7 1141 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 FEM1AQ9BSK4 669 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 MAK16Q9BXY0 300 aaKnown RBP19.19■□□□□ 0.66
PTPRK-218ENST00000525459 FBRSL1Q9HCM7 1045 aaKnown RBP19.19■□□□□ 0.66
PTPRK-218ENST00000525459 ELOVL2Q9NXB9 296 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 EFR3BQ9Y2G0 817 aa19.19■□□□□ 0.66
PTPRK-218ENST00000525459 CKAP5Q14008 2032 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 SHROOM3Q8TF72 1996 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 C3orf70A6NLC5 250 aaPredicted RBP19.18■□□□□ 0.66
PTPRK-218ENST00000525459 K7EQS6 105 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 TRIM24O15164 1050 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 AOC1P19801 751 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 IL4RP24394 825 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 PTPN7P35236 360 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 MARCKSL1P49006 195 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 PEX5P50542 639 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 GEMIN4P57678 1058 aaKnown RBP19.18■□□□□ 0.66
PTPRK-218ENST00000525459 TFDP2Q14188 446 aa19.18■□□□□ 0.66
PTPRK-218ENST00000525459 POLD3Q15054 466 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms