RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 NFKB1P19838 968 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 TRIP4Q15650 581 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 RASIP1Q5U651 963 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 NUGGCQ68CJ6 796 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 SLC8B1Q6J4K2 584 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 TRMT10BQ6PF06 316 aaKnown RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 ARNTL2Q8WYA1 636 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 NAT9Q9BTE0 207 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 PIH1D1Q9NWS0 290 aaKnown RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 MOCS1Q9NZB8 636 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 FAM169AQ9Y6X4 670 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 ARHGAP42A6NI28 874 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 WASH4PA8MWX3 477 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 TBX18O95935 607 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 PGAM1P18669 254 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 CRADDP78560 199 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 TTC39BQ5VTQ0 682 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 KCTD11Q693B1 232 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 ARHGAP36Q6ZRI8 547 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 SRLQ86TD4 932 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 TGS1Q96RS0 853 aaKnown RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 PAIP2Q9BPZ3 127 aaKnown RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 SLC39A8Q9C0K1 460 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 TMEM39AQ9NV64 488 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 MARCH2Q9P0N8 246 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 BACE2Q9Y5Z0 518 aa18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 FNDC1Q4ZHG4 1894 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC9-210ENST00000521667 ADAM12O43184 909 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 FAM155BO75949 473 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 KRT37O76014 449 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ALDH1A2O94788 518 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZWINTO95229 277 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 PSMD5Q16401 504 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 LRRC26Q2I0M4 334 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 C10orf120Q5SQS8 335 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 LGSNQ5TDP6 509 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 AFMIDQ63HM1 303 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 PIGWQ7Z7B1 504 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 MIB1Q86YT6 1006 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 RNF168Q8IYW5 571 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ATP6V0D2Q8N8Y2 350 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 BANPQ8N9N5 519 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 OR52K1Q8NGK4 314 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 GIPC2Q8TF65 315 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 IGSF21Q96ID5 467 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 MLPHQ9BV36 600 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 NDFIP2Q9NV92 336 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 SYBUQ9NX95 663 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 MPP6Q9NZW5 540 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 SAMD15Q9P1V8 674 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 FNIP2Q9P278 1114 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 RRP15Q9Y3B9 282 aaKnown RBP18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 SLC38A8A6NNN8 435 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 MAFKO60675 156 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZDHHC11BP0C7U3 371 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 CSH1P0DML2 217 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 CSH2P0DML3 217 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ATF6P18850 670 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 MS4A13Q5J8X5 152 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZNF683Q8IZ20 524 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 VWCEQ96DN2 955 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 SERAC1Q96JX3 654 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 BTN2A3PQ96KV6 586 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 KLF6Q99612 283 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 VN1R3Q9BXE9 311 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 VANGL2Q9ULK5 521 aa18.9■□□□□ 0.62
TRAPPC9-210ENST00000521667 ATXN2Q99700 1313 aaKnown RBP18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 GOLGA8RI6L899 631 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 SNRPAP09012 282 aaKnown RBP18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 CCNB1P14635 433 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 RFC2P35250 354 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 OLIG2Q13516 323 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 PRPSAP1Q14558 356 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 SLC1A5Q15758 541 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 C6orf89Q6UWU4 347 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 CNTD1Q8N815 330 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 TTC17Q96AE7 1141 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 OXNAD1Q96HP4 312 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 CABS1Q96KC9 395 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 CEP295NLQ96MC4 621 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 TTLL2Q9BWV7 592 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 C11orf49Q9H6J7 331 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 CASS4Q9NQ75 786 aa18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 PPARGC1AQ9UBK2 798 aaKnown RBP18.89■□□□□ 0.61
TRAPPC9-210ENST00000521667 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 SLC12A8A0AV02 714 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 MATN3O15232 486 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 USP12O75317 370 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 RPL17P18621 184 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 OR1D2P34982 312 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 CRYMQ14894 314 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 KIAA1841Q6NSI8 718 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 TIGD7Q6NT04 549 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 LRRC49Q8IUZ0 686 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 CCDC197Q8NCU1 140 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 USP33Q8TEY7 942 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 IL12RB2Q99665 862 aa18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 ELAC2Q9BQ52 826 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 UBE2OQ9C0C9 1292 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-210ENST00000521667 PRDM5Q9NQX1 630 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms