RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 WNT16Q9UBV4 365 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 DNAI1Q9UI46 699 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 CA14Q9ULX7 337 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 SLC27A6Q9Y2P4 619 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 TTC28Q96AY4 2481 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 K7EQS6 105 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 FGF10O15520 208 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 MFSD11O43934 449 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 KIF5CO60282 957 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ZMPSTE24O75844 475 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 CD160O95971 181 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 CYBBP04839 570 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 GLULP15104 373 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 GLDCP23378 1020 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ACVRL1P37023 503 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ARL4AP40617 200 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 EIF2DP41214 584 aaKnown RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 CSKP41240 450 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 MAPKAPK2P49137 400 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ZNF135P52742 658 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 PLK1P53350 603 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 STARD6P59095 220 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ETF1P62495 437 aaKnown RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 AMPD2Q01433 879 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 GBE1Q04446 702 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 KDSRQ06136 332 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 NR1H3Q13133 447 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 PON2Q15165 354 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 SIX1Q15475 284 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 MLF2Q15773 248 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 PPP2R5EQ16537 467 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 TFDP3Q5H9I0 405 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 TMEM196Q5HYL7 178 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 NPNTQ6UXI9 565 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 TPRG1Q6ZUI0 275 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 RALGPS2Q86X27 583 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 MFN1Q8IWA4 741 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 UBALD2Q8IYN6 164 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 UMODL1-AS1Q8N2C9 162 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 TERB1Q8NA31 727 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 OR7D4Q8NG98 312 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 UBE2Q2Q8WVN8 375 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ARHGEF2Q92974 986 aaKnown RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 FEM1AQ9BSK4 669 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 HEMGNQ9BXL5 484 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ACE2Q9BYF1 805 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 OSBPL8Q9BZF1 889 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 SLC39A8Q9C0K1 460 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 C8orf33Q9H7E9 229 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 MTF2Q9Y483 593 aaPredicted RBP10.15□□□□□ -0.78
CLN8-202ENST00000517514 JRKLQ9Y4A0 524 aa10.15□□□□□ -0.78
CLN8-202ENST00000517514 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 ILVBLA1L0T0 632 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 H0Y626 953 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 SNAP91O60641 907 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 MAP3K6O95382 1288 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 SLC34A2O95436 690 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 PDGFBP01127 241 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 EGFP01133 1207 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 RHOCP08134 193 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 PABPC1P11940 636 aaKnown RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 OR1E1P30953 314 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 CXCR5P32302 372 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 DGKGP49619 791 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 COPS2P61201 443 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 GNA12Q03113 381 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 PRKCQQ04759 706 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 KLF1Q13351 362 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 ZNF177Q13360 481 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 PLEKHG6Q3KR16 790 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 PITRM1Q5JRX3 1037 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 FAM182AQ5T1J6 154 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 EMC10Q5UCC4 262 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 RNF219Q5W0B1 726 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 PAPD7Q5XG87 772 aaKnown RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 GRAMD4Q6IC98 578 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 ARHGAP36Q6ZRI8 547 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 SETD3Q86TU7 594 aaPredicted RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 ZSCAN30Q86W11 494 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 CCDC33Q8N5R6 958 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 COG1Q8WTW3 980 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 SORCS1Q8WY21 1168 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 EDAQ92838 391 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 HMCESQ96FZ2 354 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 MYO19Q96H55 970 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 RBM41Q96IZ5 413 aaKnown RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 CELF6Q96J87 481 aaKnown RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 MRGPRX3Q96LB0 322 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 XPO6Q96QU8 1125 aaKnown RBP10.14□□□□□ -0.79
CLN8-202ENST00000517514 PNKPQ96T60 521 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 P2RY13Q9BPV8 354 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 CARD9Q9H257 536 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 RETREG1Q9H6L5 497 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 CATSPERBQ9H7T0 1116 aa10.14□□□□□ -0.79
CLN8-202ENST00000517514 ARHGEF3Q9NR81 526 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms