RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 PTPRQQ9UMZ3 2332 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 M0QYV0 167 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 SLC16A3O15427 465 aaKnown RBP16.28■□□□□ 0.2
LMNA-223ENST00000515459 BRINP1O60477 761 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 GLDCP23378 1020 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 MZF1P28698 734 aaPredicted RBP16.28■□□□□ 0.2
LMNA-223ENST00000515459 NNMTP40261 264 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 PPP2CBP62714 309 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 PPP2CAP67775 309 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 STILQ15468 1287 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.28■□□□□ 0.2
LMNA-223ENST00000515459 KANSL1Q7Z3B3 1105 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 ZNF605Q86T29 641 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 IQCHQ86VS3 1027 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 SPATS2Q86XZ4 545 aaKnown RBP16.28■□□□□ 0.2
LMNA-223ENST00000515459 HSCBQ8IWL3 235 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 APCDD1Q8J025 514 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 DQX1Q8TE96 717 aaKnown RBP16.28■□□□□ 0.2
LMNA-223ENST00000515459 RFFLQ8WZ73 363 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 SLC39A13Q96H72 371 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 HSFY1Q96LI6 401 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 MIS12Q9H081 205 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
LMNA-223ENST00000515459 ARID1BQ8NFD5 2236 aaPredicted RBP16.28■□□□□ 0.2
LMNA-223ENST00000515459 MOCS2O96007 188 aaPredicted RBP16.27■□□□□ 0.2
LMNA-223ENST00000515459 FYNP06241 537 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 ACP1P24666 158 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 DRD3P35462 400 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 NUDT1P36639 197 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 KRT85P78386 507 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 NUCB2P80303 420 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 OVGP1Q12889 678 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D25Q3MII6 688 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 LGI2Q8N0V4 545 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 DCBLD1Q8N8Z6 715 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 SPAG5Q96R06 1193 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 TSG101Q99816 390 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 KDM4CQ9H3R0 1056 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 ARHGAP20Q9P2F6 1191 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 NAALADL1Q9UQQ1 740 aa16.27■□□□□ 0.2
LMNA-223ENST00000515459 SLC7A4O43246 635 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 APOEP02649 317 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 PLA2G2AP14555 144 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 BRD2P25440 801 aaKnown RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 MAT2AP31153 395 aaKnown RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 STK19P49842 368 aaPredicted RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 FKBP3Q00688 224 aaKnown RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 E2F1Q01094 437 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 INSM1Q01101 510 aaPredicted RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 TLE3Q04726 772 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 SULT2A1Q06520 285 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 SLC12A1Q13621 1099 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 STAT4Q14765 748 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 PROX2Q3B8N5 592 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 ZNF843Q8N446 348 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 SLC35C1Q96A29 364 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 FAM131CQ96AQ9 280 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 TJP2Q9UDY2 1190 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
LMNA-223ENST00000515459 CYTH4Q9UIA0 394 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 DMTF1Q9Y222 760 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 DOCK9Q9BZ29 2069 aa16.26■□□□□ 0.19
LMNA-223ENST00000515459 RNF225M0QZC1 329 aaPredicted RBP16.25■□□□□ 0.19
LMNA-223ENST00000515459 SART1O43290 800 aaKnown RBP16.25■□□□□ 0.19
LMNA-223ENST00000515459 PLRG1O43660 514 aaKnown RBP16.25■□□□□ 0.19
LMNA-223ENST00000515459 SDC3O75056 442 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 RTN2O75298 545 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 ZNF202O95125 648 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 VAV1P15498 845 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 TACR2P21452 398 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 PRCPP42785 496 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 CXADRP78310 365 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 RAP1GAP2Q684P5 730 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 TAC4Q86UU9 113 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 TRIM69Q86WT6 500 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 CHSY1Q86X52 802 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 ERICH1Q86X53 443 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 SPACA3Q8IXA5 215 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 NT5C1BQ96P26 610 aa16.25■□□□□ 0.19
LMNA-223ENST00000515459 XPO7Q9UIA9 1087 aaKnown RBP16.25■□□□□ 0.19
LMNA-223ENST00000515459 FLNBO75369 2602 aaKnown RBP16.25■□□□□ 0.19
LMNA-223ENST00000515459 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 PRAMEF26H0Y7S4 382 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 TRIM38O00635 465 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 SIGLEC6O43699 453 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 FMO5P49326 533 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 METAP1P53582 386 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 ZNF211Q13398 564 aaPredicted RBP16.24■□□□□ 0.19
LMNA-223ENST00000515459 SETMARQ53H47 684 aaPredicted RBP16.24■□□□□ 0.19
LMNA-223ENST00000515459 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 FAM46CQ5VWP2 391 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 SYPL2Q5VXT5 272 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 KDM7AQ6ZMT4 941 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms