RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ZNF211Q13398 564 aaPredicted RBP21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 STAT4Q14765 748 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 DCAF6Q58WW2 860 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 RNF219Q5W0B1 726 aaPredicted RBP21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 CLEC4CQ8WTT0 213 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 KCTD13Q8WZ19 329 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 IRX2Q9BZI1 471 aaPredicted RBP21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 CLMPQ9H6B4 373 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 UCKL1Q9NWZ5 548 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 B8ZZF3 427 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 FFAR2O15552 330 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 USP12O75317 370 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 LUC7L3O95232 432 aaKnown RBP21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 GTF2H1P32780 548 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 NFIL3Q16649 462 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 PKDCCQ504Y2 493 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 CCDC117Q8IWD4 279 aaPredicted RBP21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 AZIN2Q96A70 460 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 WBP1Q96G27 269 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 FAXDC2Q96IV6 333 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.01■□□□□ 0.958e-12■■□□□ 13.9
SQSTM1-215ENST00000514093 OSBPL2Q9H1P3 480 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 NAV2Q8IVL1 2488 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 ITIH6Q6UXX5 1313 aa21.01■□□□□ 0.95
SQSTM1-215ENST00000514093 MOCS3O95396 460 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 MOCS2O96007 188 aaPredicted RBP21■□□□□ 0.95
SQSTM1-215ENST00000514093 MS4A13Q5J8X5 152 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 PMF1Q6P1K2 205 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 IQCHQ86VS3 1027 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 KCNE4Q8WWG9 221 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 FCRL2Q96LA5 508 aaPredicted RBP21■□□□□ 0.95
SQSTM1-215ENST00000514093 MYOCQ99972 504 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 DDX50Q9BQ39 737 aaKnown RBP21■□□□□ 0.95
SQSTM1-215ENST00000514093 XPO7Q9UIA9 1087 aaKnown RBP21■□□□□ 0.95
SQSTM1-215ENST00000514093 TPX2Q9ULW0 747 aaKnown RBP21■□□□□ 0.95
SQSTM1-215ENST00000514093 DOCK9Q9BZ29 2069 aa21■□□□□ 0.95
SQSTM1-215ENST00000514093 COL6A6A6NMZ7 2263 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 O00370 1275 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 OPA1O60313 960 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 LTFP02788 710 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 PRR29P0C7W0 189 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 VDRP11473 427 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 C6P13671 934 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 DGKAP23743 735 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 RPL13P26373 211 aaKnown RBP20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 UCNP55089 124 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 KCNC4Q03721 635 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 ENPEPQ07075 957 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 CUL2Q13617 745 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 ELAVL3Q14576 367 aaKnown RBP20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 CDCP2Q5VXM1 449 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 TTC9Q92623 222 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 KLHDC7BQ96G42 594 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 SARDHQ9UL12 918 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 HECTD1Q9ULT8 2610 aa20.99■□□□□ 0.95
SQSTM1-215ENST00000514093 A0A1B0GVL5 298 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 A0A1B0GVM2 712 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 PLRG1O43660 514 aaKnown RBP20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 MAGEC1O60732 1142 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 CSO75390 466 aaKnown RBP20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 SETSIPP0DME0 302 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 LGI2Q8N0V4 545 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 LSMEM2Q8N112 164 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 SCML4Q8N228 414 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 OR4C6Q8NH72 309 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 SLC35F5Q8WV83 523 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 TFAP2BQ92481 460 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 KLK6Q92876 244 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 MIS12Q9H081 205 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 DMTF1Q9Y222 760 aa20.98■□□□□ 0.95
SQSTM1-215ENST00000514093 NYNRINQ9P2P1 1898 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 ARHGAP6O43182 974 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 FYNP06241 537 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 GIMD1P0DJR0 217 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 NNMTP40261 264 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 VAC14Q08AM6 782 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 CNTN1Q12860 1018 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 OVGP1Q12889 678 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 LRMPQ12912 555 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 CBWD6Q4V339 395 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 HS1BP3Q53T59 392 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 CBWD3Q5JTY5 395 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 CBWD5Q5RIA9 395 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 KIAA1614Q5VZ46 1190 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 RAP1GAP2Q684P5 730 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 DQX1Q8TE96 717 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 IRGQQ8WZA9 623 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 VCPIP1Q96JH7 1222 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 DEPDC7Q96QD5 511 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 KDM4CQ9H3R0 1056 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 POLR1BQ9H9Y6 1135 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 NAALADL1Q9UQQ1 740 aa20.97■□□□□ 0.95
SQSTM1-215ENST00000514093 PRAMEF26H0Y7S4 382 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 SLC31A1O15431 190 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 SLC28A2O43868 658 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 CALCAP01258 141 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 THEGLP0DJG4 465 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 CKMT1AP12532 417 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 PRLRP16471 622 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 LSSP48449 732 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms