RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ACOX2Q99424 681 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CALN1Q9BXU9 219 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 C2orf42Q9NWW7 574 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 TRMT1Q9NXH9 659 aaKnown RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CWC15Q9P013 229 aaKnown RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 ZNF212Q9UDV6 495 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 FBXO10Q9UK96 956 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 INTS6Q9UL03 887 aaKnown RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 PACSIN2Q9UNF0 486 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 MRPS17Q9Y2R5 130 aaKnown RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 ALG6Q9Y672 507 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 NYNRINQ9P2P1 1898 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 A0A0D9SEW6 157 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 LRRD1A4D1F6 860 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 USP27XA6NNY8 438 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 H3BRJ5 948 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 SNAP91O60641 907 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 MAP3K6O95382 1288 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 RHOQP17081 205 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 AOC1P19801 751 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 DRD1P21728 446 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 AMPD1P23109 780 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 GLDCP23378 1020 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ACVRL1P37023 503 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 STK19P49842 368 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ARSEP51690 589 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 AIF1P55008 147 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 NRG1Q02297 640 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 MTA1Q13330 715 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ZNF177Q13360 481 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 LRRC32Q14392 662 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 PITRM1Q5JRX3 1037 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 MPP7Q5T2T1 576 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 RNF219Q5W0B1 726 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 RFX8Q6ZV50 586 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ADIPOR2Q86V24 386 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 CCDC117Q8IWD4 279 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 TP53INP2Q8IXH6 220 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 C17orf53Q8N3J3 647 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ALLCQ8N6M5 410 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 NPWQ8N729 165 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ZNF366Q8N895 744 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 RTL3Q8N8U3 475 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 LRRC57Q8N9N7 239 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 FIBINQ8TAL6 211 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 TEKT4Q8WW24 435 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 CELF6Q96J87 481 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 CSPG4P5Q96PW8 444 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 MUC3BQ9H195 1237 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ETNK2Q9NVF9 386 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 CACNA2D2Q9NY47 1150 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 SLC27A6Q9Y2P4 619 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 SIT1Q9Y3P8 196 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 ACTL7AQ9Y615 435 aa10.07□□□□□ -0.8
TOPBP1-209ENST00000513818 DAPK3O43293 454 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 CLDN11O75508 207 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 KLF8O95600 359 aaPredicted RBP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 ERCC2P18074 760 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 PRKCHP24723 683 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 OR1E1P30953 314 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 ARL4AP40617 200 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 DPYSQ14117 519 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 DPYSL3Q14195 570 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 PLEKHG6Q3KR16 790 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 BOLA3Q53S33 107 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 TMEM31Q5JXX7 168 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 DGKKQ5KSL6 1271 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 MBLAC2Q68D91 279 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 AADACL2Q6P093 401 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 C1orf228Q6PIY5 440 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 LEKR1Q6ZMV7 388 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 POLNQ7Z5Q5 900 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 SUGP1Q8IWZ8 645 aaKnown RBP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 RHOT1Q8IXI2 618 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 AHI1Q8N157 1196 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 ZNF513Q8N8E2 541 aaPredicted RBP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 KCTD6Q8NC69 237 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 TSC1Q92574 1164 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 ALG14Q96F25 216 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 HMCESQ96FZ2 354 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 PSMB7Q99436 277 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 NCAPGQ9BPX3 1015 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 SPON2Q9BUD6 331 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 TSGA10Q9BZW7 698 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 NOL6Q9H6R4 1146 aaKnown RBP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 TMEM248Q9NWD8 314 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 KIAA1522Q9P206 1035 aaPredicted RBP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 PPARGC1AQ9UBK2 798 aaKnown RBP10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 LCMT1Q9UIC8 334 aa10.06□□□□□ -0.8
TOPBP1-209ENST00000513818 VPS28Q9UK41 221 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms