RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 FANCMQ8IYD8 2048 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 LRRD1A4D1F6 860 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 USP27XA6NNY8 438 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 WASH4PA8MWX3 477 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF487B1APH4 448 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 H0Y626 953 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 KIF5CO60282 957 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TULP3O75386 442 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 FTCDO95954 541 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 KRT1P04264 644 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ALADP13716 330 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TNNT1P13805 278 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 RHOQP17081 205 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 GOT1P17174 413 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SOX9P48436 509 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 MARCKSL1P49006 195 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 HCAR3P49019 387 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 MAPKAPK2P49137 400 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 DGKGP49619 791 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 IRAK1P51617 712 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ARSEP51690 589 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 OXCT1P55809 520 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SIGLEC14Q08ET2 396 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF177Q13360 481 aaPredicted RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SLC12A1Q13621 1099 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 DPYSQ14117 519 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 DPYSL3Q14195 570 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TUSC1Q2TAM9 212 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SLC44A4Q53GD3 710 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ALFQ53S48 1182 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ARTNQ5T4W7 220 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 GRAMD4Q6IC98 578 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 RWDD4Q6NW29 188 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TXNDC11Q6PKC3 985 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 RFX8Q6ZV50 586 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 NLRP14Q86W24 1093 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 KATNAL2Q8IYT4 538 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 CFAP52Q8N1V2 620 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 CARNMT1Q8N4J0 409 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 UBL4BQ8N7F7 174 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 NAT16Q8N8M0 369 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TERB1Q8NA31 727 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 KCTD6Q8NC69 237 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 EXD1Q8NHP7 514 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 FIBINQ8TAL6 211 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TTC8Q8TAM2 541 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 WFIKKN2Q8TEU8 576 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TSC1Q92574 1164 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 KRT35Q92764 455 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 FAF2Q96CS3 445 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 P2RY11Q96G91 374 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SHDQ96IW2 340 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 RBM41Q96IZ5 413 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 P2RY13Q9BPV8 354 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 CALN1Q9BXU9 219 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 MAGEB5Q9BZ81 275 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 DNAJC17Q9NVM6 304 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 KLHL11Q9NVR0 708 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 TMEM248Q9NWD8 314 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 MPP6Q9NZW5 540 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 CWC15Q9P013 229 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 STIM2Q9P246 746 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 DEC1Q9P2X7 70 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF212Q9UDV6 495 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 FBXO10Q9UK96 956 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 CA14Q9ULX7 337 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ZKSCAN5Q9Y2L8 839 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 SLC27A6Q9Y2P4 619 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 MRPS17Q9Y2R5 130 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 PCDHA3Q9Y5H8 950 aa7.8□□□□□ -1.16
HMGXB3-204ENST00000513318 ZDBF2Q9HCK1 2354 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 BDP1A6H8Y1 2624 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF318Q5VUA4 2279 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 KRBA1A5PL33 1030 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 DAPK3O43293 454 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 CNTN5O94779 1100 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ZRANB2O95218 330 aaKnown RBP eCLIP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 APODP05090 189 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 CD48P09326 243 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PABPC1P11940 636 aaKnown RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ERCC2P18074 760 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 DRD1P21728 446 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 KDELR1P24390 212 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 HLA-FP30511 346 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 OR1E1P30953 314 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 SERPINB6P35237 376 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ETFBP38117 255 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 CETN2P41208 172 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 RWDD2BP57060 319 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 STARD6P59095 220 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 KDSRQ06136 332 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 DMC1Q14565 340 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 EIF4HQ15056 248 aaKnown RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PON2Q15165 354 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PPP2R5EQ16537 467 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms