RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MFSD11O43934 449 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 ADH5P11766 374 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 TYRP14679 529 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 PECAM1P16284 738 aaPredicted RBP12.87□□□□□ -0.35
PDPN-210ENST00000513143 OR1E1P30953 314 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 SERPINB6P35237 376 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 NDST2P52849 883 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 GBE1Q04446 702 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 GAD2Q05329 585 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 TNK2Q07912 1038 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 SLC10A2Q12908 348 aaPredicted RBP12.87□□□□□ -0.35
PDPN-210ENST00000513143 RUNX3Q13761 415 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 ANO4Q32M45 955 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 C6orf118Q5T5N4 469 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 CXorf57Q6NSI4 855 aaKnown RBP12.87□□□□□ -0.35
PDPN-210ENST00000513143 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 NPNTQ6UXI9 565 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
PDPN-210ENST00000513143 ARHGAP12Q8IWW6 846 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 ADHFE1Q8IWW8 467 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 P3H4Q92791 437 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 BHMTQ93088 406 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 BRD9Q9H8M2 597 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 DTLQ9NZJ0 730 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
PDPN-210ENST00000513143 FBXO10Q9UK96 956 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 CLEC4EQ9ULY5 219 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 RAD54BQ9Y620 910 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 NYNRINQ9P2P1 1898 aaKnown RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 COL4A3Q01955 1670 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 SHROOM3Q8TF72 1996 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 H0Y626 953 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 CACNG3O60359 315 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 OXCT1P55809 520 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 OTUD4Q01804 1114 aaKnown RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 ZP2Q05996 745 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 NR1H3Q13133 447 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 CDH18Q13634 790 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 NOMO1Q15155 1222 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 GAB4Q2WGN9 574 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 FSCBQ5H9T9 825 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 ZNF572Q7Z3I7 529 aaPredicted RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 MFN1Q8IWA4 741 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 OR52K2Q8NGK3 314 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 ACTL9Q8TC94 416 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 ATXN2LQ8WWM7 1075 aaKnown RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 LMLNQ96KR4 655 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 FRMD8P1Q9BZ68 369 aaPredicted RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 SLC39A8Q9C0K1 460 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 L2HGDHQ9H9P8 463 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 R3HDM2Q9Y2K5 976 aaKnown RBP12.86□□□□□ -0.35
PDPN-210ENST00000513143 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
PDPN-210ENST00000513143 KIAA1549LQ6ZVL6 1849 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 COL4A2P08572 1712 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 KRIT1O00522 736 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 NCAM2O15394 837 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 RAMP2O60895 175 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 ASGR2P07307 311 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 RHOCP08134 193 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 NUBP1P53384 320 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 GNA12Q03113 381 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 GALNT2Q10471 571 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 XRCC4Q13426 336 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
PDPN-210ENST00000513143 CCNG2Q16589 344 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 CYP1B1Q16678 543 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 ITPRIPL2Q3MIP1 535 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 PARP15Q460N3 678 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 LRRC49Q8IUZ0 686 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 CCDC117Q8IWD4 279 aaPredicted RBP12.85□□□□□ -0.35
PDPN-210ENST00000513143 TP53INP2Q8IXH6 220 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 SLC35B2Q8TB61 432 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 C1orf54Q8WWF1 131 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 HAUS1Q96CS2 278 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 ALG14Q96F25 216 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 CELF6Q96J87 481 aaKnown RBP12.85□□□□□ -0.35
PDPN-210ENST00000513143 OLFM3Q96PB7 478 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 XPO6Q96QU8 1125 aaKnown RBP12.85□□□□□ -0.35
PDPN-210ENST00000513143 MAGEH1Q9H213 219 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
PDPN-210ENST00000513143 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 GTSE1Q9NYZ3 720 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms