RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 IPO13O94829 963 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 MPOP05164 745 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 FYNP06241 537 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 SPARCP09486 303 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 ARP10275 920 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 SELLP14151 372 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 AHCYP23526 432 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 HK3P52790 923 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 SSTP61278 116 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 KDSRQ06136 332 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 TEFQ10587 303 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 SF3A3Q12874 501 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 HYAL4Q2M3T9 481 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 PCGF3Q3KNV8 242 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 HABP4Q5JVS0 413 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 EXOSC6Q5RKV6 272 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 ATAD3BQ5T9A4 648 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 HEPHL1Q6MZM0 1159 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 NCCRP1Q6ZVX7 275 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 C1orf186Q6ZWK4 172 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 RNF44Q7L0R7 432 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 KANSL1Q7Z3B3 1105 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 GPR142Q7Z601 462 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 ZNF687Q8N1G0 1237 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 WHAMMQ8TF30 809 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 TSPAN17Q96FV3 270 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 SAMD8Q96LT4 415 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 SPATA13Q96N96 652 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 PIMREGQ9BSJ6 248 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 G6PC2Q9NQR9 355 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 EHD2Q9NZN4 543 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 GAB2Q9UQC2 676 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 MRPS2Q9Y399 296 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 RWDD3Q9Y3V2 267 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 CSADQ9Y600 493 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 ADGRL2O95490 1459 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 CAMSAP2Q08AD1 1489 aa7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 PRG4Q92954 1404 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-206ENST00000508170 GPATCH8Q9UKJ3 1502 aaKnown RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 A0A087WZ62 844 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 C5orf51A6NDU8 294 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 NDUFAB1O14561 156 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 RGS13O14921 159 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 KLK10O43240 276 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 ZNF821O75541 412 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 VNN2O95498 520 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 IVLP07476 585 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 PFKMP08237 780 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 ODC1P11926 461 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 HNRNPA2B1P22626 353 aaKnown RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 HOXA6P31267 233 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 BCAT1P54687 386 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 SPIRE1Q08AE8 756 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 CEP78Q5JTW2 689 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 SFRP5Q5T4F7 317 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 TMEM214Q6NUQ4 689 aaKnown RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 RBM43Q6ZSC3 357 aaKnown RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 OR2T34Q8NGX1 318 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 OR6S1Q8NH40 331 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 DPF2Q92785 391 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 INTS14Q96SY0 518 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 SEMA3CQ99985 751 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 GORASP1Q9BQQ3 440 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 FDXACB1Q9BRP7 624 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 RAB33BQ9H082 229 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 ZNF395Q9H8N7 513 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 MBD2Q9UBB5 411 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 CD300AQ9UGN4 299 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 DPP7Q9UHL4 492 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 PTRH2Q9Y3E5 179 aaKnown RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 POLR1AO95602 1720 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 PZPP20742 1482 aa7.71□□□□□ -1.17
PDGFRA-206ENST00000508170 LOC100506127A0A0U1RQW1 187 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 HEATR9A2RTY3 570 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 GOLGA6L19H0YKK7 550 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 TNPO2O14787 897 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 WNT9AO14904 365 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 RIMBP2O15034 1052 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 CLPTM1O96005 669 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 CPA1P15085 419 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 NPPBP16860 134 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 CPN2P22792 545 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 PSMA5P28066 241 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 CDC25CP30307 473 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 ARHGAP25P42331 645 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 ME1P48163 572 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 NRIP1P48552 1158 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 PTP4A2Q12974 167 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 SNTB1Q13884 538 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 PCLAFQ15004 111 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 LRRC23Q53EV4 343 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF365Q70YC5 407 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 HTR3DQ70Z44 454 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 AMZ2Q86W34 360 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 SPARTQ8N0X7 666 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms