RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SCARA3Q6AZY7 606 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 OR6B2Q6IFH4 312 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CASC4Q6P4E1 433 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 LRRC8BQ6P9F7 803 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 EPGNQ6UW88 154 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 LCLAT1Q6UWP7 414 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NPNTQ6UXI9 565 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SCARA5Q6ZMJ2 495 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RBM44Q6ZP01 1051 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TSHZ1Q6ZSZ6 1077 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 DENND5BQ6ZUT9 1274 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDZD4Q76G19 769 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMC7Q7Z402 723 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SATL1Q86VE3 508 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNF135Q8IUD6 432 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSTKQ8IV42 348 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNF168Q8IYW5 571 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ADGRF2Q8IZF7 708 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 UNC5BQ8IZJ1 945 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PGAM4Q8N0Y7 254 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NUP93Q8N1F7 819 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CPSF7Q8N684 471 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 EMC1Q8N766 993 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CNTD1Q8N815 330 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 FBXO27Q8NI29 283 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 DIS3LQ8TF46 1054 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TFB1MQ8WVM0 346 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RXFP2Q8WXD0 754 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ISL2Q96A47 359 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CCDC124Q96CT7 223 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NMD3Q96D46 503 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAR2Q96K12 515 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 HEXIM2Q96MH2 286 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SPATA13Q96N96 652 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACO2Q99798 780 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 EBF4Q9BQW3 602 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 OSBPL11Q9BXB4 747 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NUF2Q9BZD4 464 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 UBE2OQ9C0C9 1292 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 HAPLN2Q9GZV7 340 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ILKAPQ9H0C8 392 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 XYLT2Q9H1B5 865 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDZD7Q9H5P4 517 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RPAP3Q9H6T3 665 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 C10orf88Q9H8K7 445 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 EFCAB1Q9HAE3 211 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYP4F11Q9HBI6 524 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PCDH18Q9HCL0 1135 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TCF7L2Q9NQB0 619 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 C8orf4Q9NR00 106 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 GALNT8Q9NY28 637 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 HESX1Q9UBX0 185 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ITGB1BP2Q9UKP3 347 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ADAMTS6Q9UKP5 1117 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 BARX2Q9UMQ3 279 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 LZTS1Q9Y250 596 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 HEY1Q9Y5J3 304 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RAD54BQ9Y620 910 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 AP4B1Q9Y6B7 739 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 AK5Q9Y6K8 562 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SIP14410 1827 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 IGKV6D-21A0A0A0MT36 114 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC35F4A4IF30 521 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRPC5OSA6NMA1 111 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ERI2A8K979 691 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 C19orf81C9J6K1 198 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF701M0R085 212 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACKR2O00590 384 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 VILLO15195 856 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSMD3O43242 534 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MTSS1O43312 755 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 DCXO43602 365 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ITM2AO43736 263 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MSCO60682 206 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 DNAJA2O60884 412 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 AVILO75366 819 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRMUO75648 421 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PIAS1O75925 651 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 BCAS2O75934 225 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDE5AO76074 875 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CRTAMO95727 393 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 GNRH1P01148 92 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ALDOAP04075 364 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 KRT19P08727 400 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 HOXC6P09630 235 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SMIM18P0DKX4 95 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TGFB3P10600 412 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 HSPA8P11142 646 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYP2C9P11712 490 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 COL6A2P12110 1019 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSMC3P17980 439 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYP2F1P24903 491 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TTKP33981 857 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SERPINB5P36952 375 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPARGP37231 505 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 GPD2P43304 727 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MAGEA8P43361 318 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MAGEA12P43365 314 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACADVLP49748 655 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms