RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SPEM2Q0P670 501 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 PLEKHG6Q3KR16 790 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 CCDC14Q49A88 953 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 SPDYCQ5MJ68 293 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 DNAJC24Q6P3W2 148 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 LRRC31Q6UY01 552 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 STRADAQ7RTN6 431 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 METTL3Q86U44 580 aaKnown RBP11.76□□□□□ -0.53
KDM3B-203ENST00000505756 CIR1Q86X95 450 aaPredicted RBP11.76□□□□□ -0.53
KDM3B-203ENST00000505756 FAM131BQ86XD5 332 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 TXLNBQ8N3L3 684 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 KDM1BQ8NB78 822 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 ERLEC1Q96DZ1 483 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 VCPIP1Q96JH7 1222 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 HAPLN3Q96S86 360 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 PRDM16Q9HAZ2 1276 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 INTS6Q9UL03 887 aaKnown RBP11.76□□□□□ -0.53
KDM3B-203ENST00000505756 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 ZNF292O60281 2723 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 OTOGLQ3ZCN5 2332 aa11.76□□□□□ -0.53
KDM3B-203ENST00000505756 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 TCRBV5S1A1TA0A578 114 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ANKRD62A6NC57 917 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 BTNL10A8MVZ5 291 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 MAP3K13O43283 966 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 IPO7O95373 1038 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 GJB6O95452 261 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 SRPRAP08240 638 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 GPD1P21695 349 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 RRM1P23921 792 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 RFC1P35251 1148 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 VAV2P52735 878 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 PLK1P53350 603 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 COPAP53621 1224 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 CDH4P55283 916 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 LMNB2Q03252 620 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 CAMK2GQ13555 558 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 CSRP2Q16527 193 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 CDO1Q16878 200 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 C15orf59Q2T9L4 293 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ARL13BQ3SXY8 428 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 CXorf57Q6NSI4 855 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 KIAA1324Q6UXG2 1013 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 LPCAT2Q7L5N7 544 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 TMPRSS6Q8IU80 811 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 REXO1L1PQ8IX06 675 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ZNF683Q8IZ20 524 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 MCOLN2Q8IZK6 566 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 APCDD1Q8J025 514 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 FRMD1Q8N878 549 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 CENPIQ92674 756 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 MKRN2Q9H000 416 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ISCUQ9H1K1 167 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 SLC6A17Q9H1V8 727 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ARRDC1-AS1Q9H2J1 176 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 DEF6Q9H4E7 631 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 FBRSQ9HAH7 460 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 PARD6AQ9NPB6 346 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 LUC7LQ9NQ29 371 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 TAS2R14Q9NYV8 317 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 SUN2Q9UH99 717 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ADAMTS1Q9UHI8 967 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 ERVW-1Q9UQF0 538 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
KDM3B-203ENST00000505756 GPR179Q6PRD1 2367 aa11.75□□□□□ -0.53
KDM3B-203ENST00000505756 FAM186AA6NE01 2351 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 RIF1Q5UIP0 2472 aaKnown RBP11.74□□□□□ -0.53
KDM3B-203ENST00000505756 IGLV3-10A0A075B6K4 115 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 IGHV1OR15-9A0A0B4J2B8 117 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 DRGXA6NNA5 263 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 TMCO5BA8MYB1 307 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 E9PAM4 449 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 C7P10643 843 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 HLA-EP13747 358 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 MSNP26038 577 aaKnown RBP11.74□□□□□ -0.53
KDM3B-203ENST00000505756 MPLP40238 635 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 IRAK1P51617 712 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 ZNF143P52747 638 aaPredicted RBP11.74□□□□□ -0.53
KDM3B-203ENST00000505756 HDAC4P56524 1084 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 GFPT1Q06210 699 aaPredicted RBP11.74□□□□□ -0.53
KDM3B-203ENST00000505756 SULT2A1Q06520 285 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 TCEAL1Q15170 157 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 SPA17Q15506 151 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 PLA2G2CQ5R387 149 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 SH3PXD2AQ5TCZ1 1133 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 RNF219Q5W0B1 726 aaPredicted RBP11.74□□□□□ -0.53
KDM3B-203ENST00000505756 ALKBH5Q6P6C2 394 aaKnown RBP11.74□□□□□ -0.53
KDM3B-203ENST00000505756 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 ACRBPQ8NEB7 543 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 FAM172AQ8WUF8 416 aa11.74□□□□□ -0.53
KDM3B-203ENST00000505756 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms