RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 NOMO2Q5JPE7 1267 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 SPOCD1Q6ZMY3 1216 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 KRBA2Q6ZNG9 492 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 PDZD4Q76G19 769 aaPredicted RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 MRPL10Q7Z7H8 261 aaKnown RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 TMEM173Q86WV6 379 aaPredicted RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 NELFCDQ8IXH7 590 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 CMTM4Q8IZR5 234 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 CNNM3Q8NE01 707 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 NOC3LQ8WTT2 800 aaKnown RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 HSPBAP1Q96EW2 488 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 SLC2A13Q96QE2 648 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 TGS1Q96RS0 853 aaKnown RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 C7orf25Q9BPX7 421 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 TMEM117Q9H0C3 514 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 CDH19Q9H159 772 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 MEGF9Q9H1U4 602 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 CDT1Q9H211 546 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 ELAC1Q9H777 363 aaKnown RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 C17orf75Q9HAS0 396 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 PTPRHQ9HD43 1115 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 TLR9Q9NR96 1032 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 TBC1D13Q9NVG8 400 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 ING3Q9NXR8 418 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 KLHL42Q9P2K6 505 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 IP6K2Q9UHH9 426 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 ZNF180Q9UJW8 692 aa8.04□□□□□ -1.12
UBE2B-204ENST00000504431 PNMA8BQ9ULN7 279 aaPredicted RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 G3BP2Q9UN86 482 aaKnown RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 PRRC2BQ5JSZ5 2229 aaKnown RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 COL4A4P53420 1690 aaPredicted RBP8.04□□□□□ -1.12
UBE2B-204ENST00000504431 FAM237AA0A1B0GTK4 181 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 FRMD3A2A2Y4 597 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 GOLGA8IPA6NC78 632 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 GOLGA8JA6NMD2 632 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 HNRNPDLO14979 420 aaKnown RBP8.03□□□□□ -1.12
UBE2B-204ENST00000504431 KLRC4O43908 158 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ZC3H11AO75152 810 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBE2B-204ENST00000504431 GAP43P17677 238 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CRHR1P34998 444 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 BMPR1AP36894 532 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ACOT2P49753 483 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 LIG4P49917 911 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 GTF2BQ00403 316 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 RNASELQ05823 741 aaKnown RBP8.03□□□□□ -1.12
UBE2B-204ENST00000504431 STK4Q13043 487 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 FZD5Q13467 585 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CAMK4Q16566 473 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 MST1LQ2TV78 715 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CIR1Q86X95 450 aaPredicted RBP8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CCDC65Q8IXS2 484 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 PPM1NQ8N819 430 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 COLGALT1Q8NBJ5 622 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ENGASEQ8NFI3 743 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 PGBD4Q96DM1 585 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 SAAL1Q96ER3 474 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 DPYSL5Q9BPU6 564 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 PAAF1Q9BRP4 392 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ADAM7Q9H2U9 754 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CUEDC2Q9H467 287 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 NRDE2Q9H7Z3 1164 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ZIM2Q9NZV7 527 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 NCDNQ9UBB6 729 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 TUBD1Q9UJT1 453 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 TNFSF13BQ9Y275 285 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 PRG3Q9Y2Y8 225 aaPredicted RBP8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CDH23Q9H251 3354 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 ATG2AQ2TAZ0 1938 aa8.03□□□□□ -1.12
UBE2B-204ENST00000504431 CASTOR2A6NHX0 329 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 MATN2O00339 956 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 PTGESO14684 152 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 CLIC2O15247 247 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 CLDN3O15551 220 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 RFPL1O75677 317 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.13
UBE2B-204ENST00000504431 ITGB1P05556 798 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 FOSL2P15408 326 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 PROZP22891 400 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 ADSSP30520 456 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 SLC11A1P49279 550 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 ADAM8P78325 824 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 CAMK1Q14012 370 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 ODF1Q14990 250 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 NOMO1Q15155 1222 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 NFE2Q16621 373 aaPredicted RBP8.02□□□□□ -1.13
UBE2B-204ENST00000504431 UNC13DQ70J99 1090 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 TAX1BP1Q86VP1 789 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 SYCP3Q8IZU3 236 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 LRRC43Q8N309 656 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 URGCPQ8TCY9 931 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 HASPINQ8TF76 798 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 SCFD1Q8WVM8 642 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 HDAC10Q969S8 669 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 C18orf25Q96B23 403 aaPredicted RBP8.02□□□□□ -1.13
UBE2B-204ENST00000504431 ARL8AQ96BM9 186 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 B3GALT6Q96L58 329 aa8.02□□□□□ -1.13
UBE2B-204ENST00000504431 ZMAT2Q96NC0 199 aaKnown RBP8.02□□□□□ -1.13
UBE2B-204ENST00000504431 TCF25Q9BQ70 676 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms