RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ZNF843Q8N446 348 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 SLC39A13Q96H72 371 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 DDX50Q9BQ39 737 aaKnown RBP15.2■□□□□ 0.02
TRAF4-212ENST00000498540 MIS12Q9H081 205 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 ERVMER34-1Q9H9K5 563 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 ARHGAP20Q9P2F6 1191 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 KIAA1257Q9ULG3 409 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 RNF225M0QZC1 329 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 SDC3O75056 442 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 MOCS3O95396 460 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 PAEPP09466 180 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 GLDCP23378 1020 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 TBXAS1P24557 533 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 BRD2P25440 801 aaKnown RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 MAT2AP31153 395 aaKnown RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 INSM1Q01101 510 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 TLE3Q04726 772 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 CCDC173Q0VFZ6 552 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 ILKQ13418 452 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 ELAVL3Q14576 367 aaKnown RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 PROX2Q3B8N5 592 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 RNF219Q5W0B1 726 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 PCSK4Q6UW60 755 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 TAC4Q86UU9 113 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 ERICH1Q86X53 443 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 CCDC117Q8IWD4 279 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-212ENST00000498540 LGI2Q8N0V4 545 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 OXR1Q8N573 874 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 MFSD2AQ8NA29 543 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 RFFLQ8WZ73 363 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 FGF11Q92914 225 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 SERPINB11Q96P15 392 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 CLCA2Q9UQC9 943 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 NAALADL1Q9UQQ1 740 aa15.19■□□□□ 0.02
TRAF4-212ENST00000498540 ATMQ13315 3056 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 SLC16A3O15427 465 aaKnown RBP15.18■□□□□ 0.02
TRAF4-212ENST00000498540 RTN2O75298 545 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 FBXO21O94952 628 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 ACP1P24666 158 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 NNTQ13423 1086 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 CNGA2Q16280 664 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D25Q3MII6 688 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 RAP1GAP2Q684P5 730 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 GPR155Q7Z3F1 870 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 SPACA3Q8IXA5 215 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 DCBLD1Q8N8Z6 715 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 LSM14AQ8ND56 463 aaKnown RBP15.18■□□□□ 0.02
TRAF4-212ENST00000498540 KAT5Q92993 513 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 FAM131CQ96AQ9 280 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 CYTH4Q9UIA0 394 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 TPX2Q9ULW0 747 aaKnown RBP15.18■□□□□ 0.02
TRAF4-212ENST00000498540 CA5BQ9Y2D0 317 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 PCDHB4Q9Y5E5 795 aa15.18■□□□□ 0.02
TRAF4-212ENST00000498540 TEX51A0A1B0GUA7 166 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 TRIM38O00635 465 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 SIGLEC6O43699 453 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 TACR2P21452 398 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 ACTN2P35609 894 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 PRCPP42785 496 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 PMS1P54277 932 aaKnown RBP15.17■□□□□ 0.02
TRAF4-212ENST00000498540 CXADRP78310 365 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 SYPL2Q5VXT5 272 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 KDM7AQ6ZMT4 941 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 ZNF605Q86T29 641 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 PRPF39Q86UA1 669 aaKnown RBP15.17■□□□□ 0.02
TRAF4-212ENST00000498540 CHSY1Q86X52 802 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 CIR1Q86X95 450 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-212ENST00000498540 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 CACTIN-AS1Q8N1I8 211 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 FRS2Q8WU20 508 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 FAM149B1Q96BN6 582 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 HSFY1Q96LI6 401 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 SPAG5Q96R06 1193 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 SARDHQ9UL12 918 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 PCDHB1Q9Y5F3 818 aa15.17■□□□□ 0.02
TRAF4-212ENST00000498540 PLRG1O43660 514 aaKnown RBP15.16■□□□□ 0.02
TRAF4-212ENST00000498540 PDGFRAP16234 1089 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 KRT85P78386 507 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 POM121L1PQ3SYA9 428 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 ZC3H12AQ5D1E8 599 aaKnown RBP15.16■□□□□ 0.02
TRAF4-212ENST00000498540 AGBL4Q5VU57 503 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 ANKRD40Q6AI12 368 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 IQCHQ86VS3 1027 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 TRIM69Q86WT6 500 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 SLC25A45Q8N413 288 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 CAAP1Q9H8G2 361 aa15.16■□□□□ 0.02
TRAF4-212ENST00000498540 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-212ENST00000498540 TDRD6O60522 2096 aaKnown RBP15.16■□□□□ 0.02
TRAF4-212ENST00000498540 TRIM49BA6NDI0 452 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 CAPN9O14815 690 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 SLC7A4O43246 635 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 ZNF202O95125 648 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 MT-CO3P00414 261 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 APOEP02649 317 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms