RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 KAZNQ674X7 775 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 AADACL2Q6P093 401 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 C1orf228Q6PIY5 440 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 MFSD7Q6UXD7 560 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 SPOCD1Q6ZMY3 1216 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 ANKS1BQ7Z6G8 1248 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 ZNF354CQ86Y25 554 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 RFX6Q8HWS3 928 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 RCOR2Q8IZ40 523 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 SLC35F6Q8N357 371 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 PHTF2Q8N3S3 785 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 ZNF557Q8N988 423 aaPredicted RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 TERB1Q8NA31 727 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 OR7D4Q8NG98 312 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 EXD1Q8NHP7 514 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 PCDH19Q8TAB3 1148 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 HES6Q96HZ4 224 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 RBM41Q96IZ5 413 aaKnown RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 CELF6Q96J87 481 aaKnown RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 ZNF670Q9BS34 389 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 SPON2Q9BUD6 331 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 CIPCQ9C0C6 399 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 ZDHHC4Q9NPG8 344 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 RBM12Q9NTZ6 932 aaKnown RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 ETNK2Q9NVF9 386 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 KIAA1522Q9P206 1035 aaPredicted RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 ZNF212Q9UDV6 495 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 VPS28Q9UK41 221 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 TBC1D30Q9Y2I9 924 aa12.22□□□□□ -0.45
CUX1-210ENST00000497815 MRPS17Q9Y2R5 130 aaKnown RBP12.22□□□□□ -0.45
CUX1-210ENST00000497815 A0A0D9SEW6 157 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 ANTXRLA6NF34 631 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 TMEM221A6NGB7 291 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 FAM170BA6NMN3 283 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 PRRT4C9JH25 899 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 M0R296 226 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 ENC1O14682 589 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 RAMP2O60895 175 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 PYGMP11217 842 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 KRT10P13645 584 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 DRD1P21728 446 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 TARSP26639 723 aaKnown RBP12.21□□□□□ -0.45
CUX1-210ENST00000497815 CDKN2BP42772 138 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 GNG11P61952 73 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 DYNLT1P63172 113 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 GNA12Q03113 381 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 FUT11Q495W5 492 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 PITRM1Q5JRX3 1037 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 EMC10Q5UCC4 262 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 TMCO3Q6UWJ1 677 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 NUDT18Q6ZVK8 323 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 SETD3Q86TU7 594 aaPredicted RBP12.21□□□□□ -0.45
CUX1-210ENST00000497815 AHI1Q8N157 1196 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 NPWQ8N729 165 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.21□□□□□ -0.452e-6■■■■■ 29.2
CUX1-210ENST00000497815 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.45
CUX1-210ENST00000497815 SORCS1Q8WY21 1168 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.45
CUX1-210ENST00000497815 LMLNQ96KR4 655 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 RNF157Q96PX1 679 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 PSMB7Q99436 277 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 LTB4R2Q9NPC1 389 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
CUX1-210ENST00000497815 INTS6Q9UL03 887 aaKnown RBP12.21□□□□□ -0.45
CUX1-210ENST00000497815 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 SLC27A6Q9Y2P4 619 aa12.21□□□□□ -0.45
CUX1-210ENST00000497815 ILVBLA1L0T0 632 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 WASH4PA8MWX3 477 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 K7EQS6 105 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 DFFAO00273 331 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 DCLK1O15075 740 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 POLR2EP19388 210 aaKnown RBP12.2□□□□□ -0.46
CUX1-210ENST00000497815 MSNP26038 577 aaKnown RBP12.2□□□□□ -0.46
CUX1-210ENST00000497815 ACVRL1P37023 503 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 OXCT1P55809 520 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 POLD3Q15054 466 aaPredicted RBP12.2□□□□□ -0.46
CUX1-210ENST00000497815 PLEKHG6Q3KR16 790 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 C2orf27AQ580R0 203 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 TMEM215Q68D42 235 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 MBLAC2Q68D91 279 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 NCBP2-AS2Q69YL0 99 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 IL31Q6EBC2 164 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 ADIPOR2Q86V24 386 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 SUGP1Q8IWZ8 645 aaKnown RBP12.2□□□□□ -0.46
CUX1-210ENST00000497815 TP53INP2Q8IXH6 220 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 WFIKKN2Q8TEU8 576 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 FAF2Q96CS3 445 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 FEM1AQ9BSK4 669 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 TLR10Q9BXR5 811 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 SLC39A8Q9C0K1 460 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 RETREG1Q9H6L5 497 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 NOL6Q9H6R4 1146 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms