RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 KLHL11Q9NVR0 708 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 PCDHA3Q9Y5H8 950 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 MIA3Q5JRA6 1907 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 CCDC66A2RUB6 948 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 DCDC2BA2VCK2 349 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 LRRD1A4D1F6 860 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 USP27XA6NNY8 438 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 MIF4GDA9UHW6 222 aaKnown RBP20.6■□□□□ 0.89
CTSD-206ENST00000497544 KIF5CO60282 957 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 TULP3O75386 442 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 LUC7L3O95232 432 aaKnown RBP20.6■□□□□ 0.89
CTSD-206ENST00000497544 KRT1P04264 644 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 RHOQP17081 205 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 GOT1P17174 413 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 SDHBP21912 280 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 CTNNA2P26232 953 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 OPRD1P41143 372 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 HCAR3P49019 387 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 DGKGP49619 791 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 GALK1P51570 392 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 IRAK1P51617 712 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 ALFQ53S48 1182 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 GRAMD4Q6IC98 578 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 NUDT18Q6ZVK8 323 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 CHST9Q7L1S5 443 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 C12orf40Q86WS4 652 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 ETFBKMTQ8IXQ9 262 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 UBL4BQ8N7F7 174 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 FIBINQ8TAL6 211 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 FAM3CQ92520 227 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 CD101Q93033 1021 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 PNKPQ96T60 521 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 P2RY13Q9BPV8 354 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 DONSONQ9NYP3 566 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 CWC15Q9P013 229 aaKnown RBP20.6■□□□□ 0.89
CTSD-206ENST00000497544 FBXO10Q9UK96 956 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 CLEC4EQ9ULY5 219 aa20.6■□□□□ 0.89
CTSD-206ENST00000497544 FGF10O15520 208 aaPredicted RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 ZRANB2O95218 330 aaKnown RBP eCLIP20.59■□□□□ 0.89
CTSD-206ENST00000497544 MSNP26038 577 aaKnown RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 OR1E1P30953 314 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 CTNNA1P35221 906 aaKnown RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 ARSEP51690 589 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 OXCT1P55809 520 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 ZC3H14Q6PJT7 736 aaKnown RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 ZNF852Q6ZMS4 543 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 RFX8Q6ZV50 586 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 TFAP2DQ7Z6R9 452 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 RCOR2Q8IZ40 523 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 SIX5Q8N196 739 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 FAM71BQ8TC56 605 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 RAPGEF5Q92565 580 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 KRT35Q92764 455 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 RNF25Q96BH1 459 aaPredicted RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 CHFRQ96EP1 664 aa20.59■□□□□ 0.89
CTSD-206ENST00000497544 KIAA1522Q9P206 1035 aaPredicted RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 RCOR3Q9P2K3 495 aaPredicted RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 MRPS17Q9Y2R5 130 aaKnown RBP20.59■□□□□ 0.89
CTSD-206ENST00000497544 NUP205Q92621 2012 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 KRBA1A5PL33 1030 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 STK25O00506 426 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 APODP05090 189 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 CISD3P0C7P0 127 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 AMPD1P23109 780 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 HOXC13P31276 330 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 RWDD2BP57060 319 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 DPYSL3Q14195 570 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 PON2Q15165 354 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 ZNF569Q5MCW4 686 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 ARTNQ5T4W7 220 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 RNF43Q68DV7 783 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 KATNAL2Q8IYT4 538 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 MAK16Q9BXY0 300 aaKnown RBP20.58■□□□□ 0.89
CTSD-206ENST00000497544 ARHGEF4Q9NR80 690 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 KCND1Q9NSA2 647 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 TMEM248Q9NWD8 314 aa20.58■□□□□ 0.89
CTSD-206ENST00000497544 PACSIN2Q9UNF0 486 aaPredicted RBP20.58■□□□□ 0.89
CTSD-206ENST00000497544 ASPMQ8IZT6 3477 aa20.58■□□□□ 0.88
CTSD-206ENST00000497544 TBC1D3BA6NDS4 549 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 RHOCP08134 193 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 COL4A2P08572 1712 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 CD48P09326 243 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 ERCC2P18074 760 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 CD72P21854 359 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 CETN2P41208 172 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 MAPKAPK2P49137 400 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 STARD6P59095 220 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 KDSRQ06136 332 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 GRSF1Q12849 480 aaKnown RBP eCLIP20.57■□□□□ 0.88
CTSD-206ENST00000497544 MMRN1Q13201 1228 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 C6orf118Q5T5N4 469 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 NAIF1Q69YI7 327 aaPredicted RBP20.57■□□□□ 0.88
CTSD-206ENST00000497544 TXNDC11Q6PKC3 985 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 SETD3Q86TU7 594 aaPredicted RBP20.57■□□□□ 0.88
CTSD-206ENST00000497544 RTL3Q8N8U3 475 aaKnown RBP20.57■□□□□ 0.88
CTSD-206ENST00000497544 EXD1Q8NHP7 514 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 WFDC5Q8TCV5 224 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 RBM41Q96IZ5 413 aaKnown RBP20.57■□□□□ 0.88
CTSD-206ENST00000497544 CSPG4P5Q96PW8 444 aa20.57■□□□□ 0.88
CTSD-206ENST00000497544 ZNF670Q9BS34 389 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms