RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CCDC170Q8IYT3 715 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 CHST13Q8NET6 341 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 NLGN4YQ8NFZ3 816 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 OR56A1Q8NGH5 318 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF384Q8TF68 577 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 FAM120BQ96EK7 910 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 CALML4Q96GE6 196 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF764Q96H86 408 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 LRIG1Q96JA1 1093 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 CHST8Q9H2A9 424 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 TSPY26PQ9H489 355 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 BRF2Q9HAW0 419 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 CNNM1Q9NRU3 951 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 RLIMQ9NVW2 624 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 DCAF16Q9NXF7 216 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF215Q9UL58 517 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 ZDHHC8Q9ULC8 765 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 AGAP1Q9UPQ3 857 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 NAALADL1Q9UQQ1 740 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 MTO1Q9Y2Z2 717 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 TRIM17Q9Y577 477 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 PSAT1Q9Y617 370 aa3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 COL2A1P02458 1487 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-208ENST00000496910 NCANO14594 1321 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 KIF27Q86VH2 1401 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TMEM233B4DJY2 109 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 INO80B-WBP1J3KQ70 363 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 BTN3A1O00481 513 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SH2B2O14492 632 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TBCAO75347 108 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 DNAJB5O75953 348 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 USP1O94782 785 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 AGFG2O95081 481 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 GJB1P08034 283 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 C1SP09871 688 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 THEGLP0DJG4 465 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 LAMP2P13473 410 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SCG2P13521 617 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 KCNA2P16389 499 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TM4SF1P30408 202 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 EPHX2P34913 555 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TOB1P50616 345 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SOX8P57073 446 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 PSMC6P62333 389 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 EXOSC9Q06265 439 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 STK4Q13043 487 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SLC13A2Q13183 592 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 PUM1Q14671 1186 aaKnown RBP eCLIP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 BAK1Q16611 211 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TMEM266Q2M3C6 531 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 USP39Q53GS9 565 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 CRB2Q5IJ48 1285 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 UTP14CQ5TAP6 766 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 FNDC7Q5VTL7 733 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ERICH6BQ5W0A0 696 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ARL6IP4Q66PJ3 421 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 B3GNTL1Q67FW5 361 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 KIAA0408Q6ZU52 694 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 BTN2A1Q7KYR7 527 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 GDF7Q7Z4P5 450 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ANKS1BQ7Z6G8 1248 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 CPLX4Q7Z7G2 160 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 RAB11FIP4Q86YS3 637 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ARMC8Q8IUR7 673 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 GSPT2Q8IYD1 628 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 NUP93Q8N1F7 819 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF619Q8N2I2 560 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TTC39CQ8N584 583 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SRBD1Q8N5C6 995 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 OTUD6BQ8N6M0 293 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 FITM2Q8N6M3 262 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 OR6B3Q8NGW1 331 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 OR6Y1Q8NGX8 325 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 BRIX1Q8TDN6 353 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 USP6NLQ92738 828 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SDCCAG3Q96C92 435 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF503Q96F45 646 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF845Q96IR2 970 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF333Q96JL9 665 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TSGA13Q96PP4 275 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 FNBP1Q96RU3 617 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 IWS1Q96ST2 819 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ADAM2Q99965 735 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 RTKNQ9BST9 563 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 PACSIN1Q9BY11 444 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 MAGEB5Q9BZ81 275 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TTYH1Q9H313 450 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 SYNCQ9H7C4 482 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 CHODLQ9H9P2 273 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 AURKAIP1Q9NWT8 199 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ETAA1Q9NY74 926 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 PI4KBQ9UBF8 816 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 GTF3C4Q9UKN8 822 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 HSF4Q9ULV5 492 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 TMEM5Q9Y2B1 443 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 MED16Q9Y2X0 877 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 USP15Q9Y4E8 981 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms