RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 KAZNQ674X7 775 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 SLC9A4Q6AI14 798 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 NUDT18Q6ZVK8 323 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 ANKS1BQ7Z6G8 1248 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 PQLC3Q8N755 202 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 CHFRQ96EP1 664 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 PBKQ96KB5 322 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 PSMB7Q99436 277 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 P2RY13Q9BPV8 354 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 ABCB8Q9NUT2 735 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 NDFIP2Q9NV92 336 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 ETNK2Q9NVF9 386 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 MAN2B1O00754 1011 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 RAMP2O60895 175 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 HLA-FP30511 346 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 CASQ1P31415 396 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 ETFBP38117 255 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 NDST2P52849 883 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 YBEYP58557 167 aaPredicted RBP22.33■■□□□ 1.16
C9orf3-222ENST00000496567 PRKCQQ04759 706 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 LMAN2Q12907 356 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 PAFAH1B3Q15102 231 aaKnown RBP22.33■■□□□ 1.16
C9orf3-222ENST00000496567 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.33■■□□□ 1.16
C9orf3-222ENST00000496567 MUC3BQ9H195 1237 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 MAGEH1Q9H213 219 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 GGA2Q9UJY4 613 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 SNX12Q9UMY4 172 aa22.33■■□□□ 1.16
C9orf3-222ENST00000496567 CST8O60676 142 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 TJP3O95049 919 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 PABPC1P11940 636 aaKnown RBP22.32■■□□□ 1.16
C9orf3-222ENST00000496567 GNA12Q03113 381 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 DMC1Q14565 340 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 POLD3Q15054 466 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-222ENST00000496567 LLGL1Q15334 1064 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 RNF219Q5W0B1 726 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-222ENST00000496567 NCBP2-AS2Q69YL0 99 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 ASTLQ6HA08 431 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-222ENST00000496567 SYT10Q6XYQ8 523 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 TPRG1Q6ZUI0 275 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 WFIKKN2Q8TEU8 576 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 SHDQ96IW2 340 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 HEMGNQ9BXL5 484 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 ARHGEF3Q9NR81 526 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 CA14Q9ULX7 337 aa22.32■■□□□ 1.16
C9orf3-222ENST00000496567 APODP05090 189 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 PRLRP16471 622 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 TCP1P17987 556 aaKnown RBP22.31■■□□□ 1.16
C9orf3-222ENST00000496567 CXCR5P32302 372 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 CD70P32970 193 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 GRIA2P42262 883 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 GALK1P51570 392 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 KDSRQ06136 332 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 PARP15Q460N3 678 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 IER5LQ5T953 404 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 PAPD7Q5XG87 772 aaKnown RBP22.31■■□□□ 1.16
C9orf3-222ENST00000496567 AADACL2Q6P093 401 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 BBS12Q6ZW61 710 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 KIAA0907Q7Z7F0 614 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-222ENST00000496567 AHI1Q8N157 1196 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 PLD5Q8N7P1 536 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 LMLNQ96KR4 655 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 OSBPL9Q96SU4 736 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 KLC2Q9H0B6 622 aa22.31■■□□□ 1.16
C9orf3-222ENST00000496567 CES2O00748 559 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 TRIM24O15164 1050 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 TGM2P21980 687 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 CSKP41240 450 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 PLK1P53350 603 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 DYNLT1P63172 113 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 ZXDAP98168 799 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 TXNDC11Q6PKC3 985 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 ZNF852Q6ZMS4 543 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 PHTF2Q8N3S3 785 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 NPWQ8N729 165 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 TERB1Q8NA31 727 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 OR52K2Q8NGK3 314 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 FAM3CQ92520 227 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 FEM1AQ9BSK4 669 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 MFHAS1Q9Y4C4 1052 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 RAD54BQ9Y620 910 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 KIAA1549LQ6ZVL6 1849 aa22.3■■□□□ 1.16
C9orf3-222ENST00000496567 TBC1D3BA6NDS4 549 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 RASA4BC9J798 803 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 RASA4O43374 803 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 ZNF500O60304 480 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 CEP104O60308 925 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 KAT7O95251 611 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 MZF1P28698 734 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 PON2Q15165 354 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 PLEKHG6Q3KR16 790 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 CCDC181Q5TID7 509 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 AFMIDQ63HM1 303 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 NAIF1Q69YI7 327 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 BZW1Q7L1Q6 419 aaKnown RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 CELF6Q96J87 481 aaKnown RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 NOL6Q9H6R4 1146 aaKnown RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 LRRC19Q9H756 370 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 VPS28Q9UK41 221 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 SAR1BQ9Y6B6 198 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 A0A0A0MRY4 1105 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms