RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	DGKG	P49619	791 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	GALK1	P51570	392 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	DYNLT1	P63172	113 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	PFKP	Q01813	784 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	SLC10A2	Q12908	348 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	NR1H3	Q13133	447 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	CDH18	Q13634	790 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	PON2	Q15165	354 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	MLF2	Q15773	248 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	FUT11	Q495W5	492 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	TFDP3	Q5H9I0	405 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	SLC9A4	Q6AI14	798 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	SYT10	Q6XYQ8	523 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	TPRG1	Q6ZUI0	275 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	VSIG1	Q86XK7	387 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	OR7D4	Q8NG98	312 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	LRRN4	Q8WUT4	740 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	RBM41	Q96IZ5	413 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	CATSPERB	Q9H7T0	1116 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	SAE1	Q9UBE0	346 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	HCN2	Q9UL51	889 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZNF487	B1APH4	448 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	DLL1	O00548	723 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZNF185	O15231	689 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	PECAM1	P16284	738 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	GLDC	P23378	1020 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	MAPKAPK2	P49137	400 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZNF135	P52742	658 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ETF1	P62495	437 aa	Known RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZXDA	P98168	799 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	GBE1	Q04446	702 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZNF177	Q13360	481 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	PPP2R5E	Q16537	467 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	FAM182A	Q5T1J6	154 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	RNF219	Q5W0B1	726 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	AFMID	Q63HM1	303 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ARHGAP36	Q6ZRI8	547 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ADIPOR2	Q86V24	386 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	RFX6	Q8HWS3	928 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	MAP7D3	Q8IWC1	876 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	COG1	Q8WTW3	980 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	XPO6	Q96QU8	1125 aa	Known RBP	13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	OSBPL8	Q9BZF1	889 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	SLC39A8	Q9C0K1	460 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	LRRC19	Q9H756	370 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ARHGEF3	Q9NR81	526 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	SMARCAL1	Q9NZC9	954 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	GGA2	Q9UJY4	613 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	ACTL7A	Q9Y615	435 aa		13.85	□□□□□ -0.19
PTPN7-218	ENST00000496197	CST8	O60676	142 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	RHOC	P08134	193 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	CHRM1	P11229	460 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	PABPC1	P11940	636 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	PTPN7	P35236	360 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	EIF2D	P41214	584 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	CTSO	P43234	321 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	GNA12	Q03113	381 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	KLF1	Q13351	362 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	PAFAH1B3	Q15102	231 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	ODF2	Q5BJF6	829 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	PITRM1	Q5JRX3	1037 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	GRAMD4	Q6IC98	578 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	FSTL4	Q6MZW2	842 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	C1orf228	Q6PIY5	440 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	TMCO3	Q6UWJ1	677 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	SETD3	Q86TU7	594 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	RALGPS2	Q86X27	583 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	UBALD2	Q8IYN6	164 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	UMODL1-AS1	Q8N2C9	162 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	TERB1	Q8NA31	727 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	SORCS1	Q8WY21	1168 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	ARHGEF2	Q92974	986 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	HAUS1	Q96CS2	278 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	HMCES	Q96FZ2	354 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	MS4A14	Q96JA4	679 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	OSBPL9	Q96SU4	736 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	P2RY13	Q9BPV8	354 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	FAM118B	Q9BPY3	351 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	SLC2A11	Q9BYW1	496 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	CARD9	Q9H257	536 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZDHHC4	Q9NPG8	344 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	DEC1	Q9P2X7	70 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	WNT16	Q9UBV4	365 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	SNX12	Q9UMY4	172 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	SLC27A6	Q9Y2P4	619 aa		13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	MTF2	Q9Y483	593 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-218	ENST00000496197	MYO18A	Q92614	2054 aa	Known RBP	13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	RASA4B	C9J798	803 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197		K7EQS6	105 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	APOL1	O14791	398 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	RASA4	O43374	803 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	SNAP91	O60641	907 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	KAT7	O95251	611 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	EGF	P01133	1207 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	COPS2	P61201	443 aa		13.83	□□□□□ -0.2
PTPN7-218	ENST00000496197	AMPD2	Q01433	879 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms