RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SYCP1Q15431 976 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 UAP1L1Q3KQV9 507 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 SH3PXD2AQ5TCZ1 1133 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 NAA35Q5VZE5 725 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 PSAPL1Q6NUJ1 521 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 CACUL1Q86Y37 369 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 PABPC3Q9H361 631 aaKnown RBP24.95■■□□□ 1.58
HLA-C-209ENST00000495835 NLRC4Q9NPP4 1024 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 SLCO3A1Q9UIG8 710 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 TTC34A8MYJ7 566 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 ENDOD1O94919 500 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 ADCY5O95622 1261 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 SEMA4FO95754 770 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 PDGFRAP16234 1089 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 MAOBP27338 520 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 FMO1Q01740 532 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 UBXN1Q04323 297 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 LRRC31Q6UY01 552 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 FAM124AQ86V42 546 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 DHX40Q8IX18 779 aaKnown RBP24.94■■□□□ 1.58
HLA-C-209ENST00000495835 MINDY1Q8N5J2 469 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 C1orf216Q8TAB5 229 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 ALG14Q96F25 216 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 HAPLN3Q96S86 360 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 TBCBQ99426 244 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 BPIFA3Q9BQP9 254 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 FEM1AQ9BSK4 669 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 GTPBP2Q9BX10 602 aaKnown RBP24.94■■□□□ 1.58
HLA-C-209ENST00000495835 ADAM33Q9BZ11 813 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 SIK2Q9H0K1 926 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 ADAMTS1Q9UHI8 967 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 FZD4Q9ULV1 537 aa24.94■■□□□ 1.58
HLA-C-209ENST00000495835 DRGXA6NNA5 263 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 EPHB6O15197 1021 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 BCAT2O15382 392 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 CHRNB2P17787 502 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 MZF1P28698 734 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 PMLP29590 882 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 FLT3P36888 993 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 TYRO3Q06418 890 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 HNRNPDQ14103 355 aaKnown RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 CST6Q15828 149 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 LRSAM1Q6UWE0 723 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 PIP4P1Q86T03 277 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 CIR1Q86X95 450 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 PTPRN2Q92932 1015 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 RPL10LQ96L21 214 aaKnown RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 PCMTD1Q96MG8 357 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 SLC25A13Q9UJS0 675 aa24.93■■□□□ 1.58
HLA-C-209ENST00000495835 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.93■■□□□ 1.58
HLA-C-209ENST00000495835 ADH1BP00325 375 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 TFE3P19532 575 aaPredicted RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 KCNA4P22459 653 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 SHC2P98077 582 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 CENPCQ03188 943 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 ELAVL3Q14576 367 aaKnown RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 IL27RAQ6UWB1 636 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 APTXQ7Z2E3 356 aaKnown RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 C14orf80Q86SX3 495 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 SETD3Q86TU7 594 aaPredicted RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 ZNF683Q8IZ20 524 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 SLC20A1Q8WUM9 679 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 FAM129BQ96TA1 746 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 MIR1-1HGQ9H1L0 117 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 HSD3B7Q9H2F3 369 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 MTG2Q9H4K7 406 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 C6orf106Q9H6K1 298 aaPredicted RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 FBXL12Q9NXK8 326 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 EIF2B4Q9UI10 523 aaKnown RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 TPX2Q9ULW0 747 aaKnown RBP24.92■■□□□ 1.58
HLA-C-209ENST00000495835 OR51B4Q9Y5P0 310 aa24.92■■□□□ 1.58
HLA-C-209ENST00000495835 PCNX2A6NKB5 2137 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 NUMA1Q14980 2115 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 IGLV3-10A0A075B6K4 115 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 GOLGA8SH3BPF8 625 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 ATP9BO43861 1147 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 GJB3O75712 270 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 CCDC172P0C7W6 258 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 UNGP13051 313 aaPredicted RBP24.91■■□□□ 1.58
HLA-C-209ENST00000495835 C5AR1P21730 350 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 RDXP35241 583 aaKnown RBP24.91■■□□□ 1.58
HLA-C-209ENST00000495835 GSCP56915 257 aaPredicted RBP24.91■■□□□ 1.58
HLA-C-209ENST00000495835 KRT83P78385 493 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 ZCCHC9Q8N567 271 aaKnown RBP24.91■■□□□ 1.58
HLA-C-209ENST00000495835 RETREG1Q9H6L5 497 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 TMEM63CQ9P1W3 806 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 ANGPTL2Q9UKU9 493 aa24.91■■□□□ 1.58
HLA-C-209ENST00000495835 NYNRINQ9P2P1 1898 aaKnown RBP24.91■■□□□ 1.58
HLA-C-209ENST00000495835 SLC8A1P32418 973 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 AFF3P51826 1226 aaKnown RBP24.9■■□□□ 1.58
HLA-C-209ENST00000495835 GRIK2Q13002 908 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 C2CD6Q53TS8 623 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 DSG4Q86SJ6 1040 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 MMAAQ8IVH4 418 aaKnown RBP24.9■■□□□ 1.58
HLA-C-209ENST00000495835 FRS2Q8WU20 508 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 CFAP57Q96MR6 1250 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 FSCN3Q9NQT6 498 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 ANLNQ9NQW6 1124 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 VPS28Q9UK41 221 aa24.9■■□□□ 1.58
HLA-C-209ENST00000495835 DOCK4Q8N1I0 1966 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms