RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TMPRSS6Q8IU80 811 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 DDIASQ8IXT1 998 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
GPC1-209ENST00000495100 BLOC1S5Q8TDH9 187 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 TRPV6Q9H1D0 765 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 COG4Q9H9E3 785 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 THAP1Q9NVV9 213 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 CAPN8A6NHC0 703 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 C2P06681 752 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 PFKMP08237 780 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SPRP35270 261 aaPredicted RBP13.74□□□□□ -0.21
GPC1-209ENST00000495100 COG7P83436 770 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 TNFAIP8L3Q5GJ75 292 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 EFHC1Q5JVL4 640 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 BTBD8Q5XKL5 378 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SIGLEC10Q96LC7 697 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 OR52B2Q96RD2 323 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 HBEGFQ99075 208 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 NPAS2Q99743 824 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 EBF2Q9HAK2 575 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SSX2IPQ9Y2D8 614 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 UBR3Q6ZT12 1888 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 BTBD19C9JJ37 291 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 FAM189A1O60320 539 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 BIRC2Q13490 618 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SLC9B1Q4ZJI4 515 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 NCBP2-AS2Q69YL0 99 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 OSTM1Q86WC4 334 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 CIR1Q86X95 450 aaPredicted RBP13.74□□□□□ -0.21
GPC1-209ENST00000495100 ANKRD52Q8NB46 1076 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SLC45A3Q96JT2 553 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 DNAI2Q9GZS0 605 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 NT5MQ9NPB1 228 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 RBM22Q9NW64 420 aaKnown RBP eCLIP13.74□□□□□ -0.21
GPC1-209ENST00000495100 A8MX80 341 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 TCEA3O75764 348 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SUPT7LO94864 414 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 ALDOAP04075 364 aaKnown RBP13.74□□□□□ -0.21
GPC1-209ENST00000495100 CCNB1P14635 433 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 PEX2P28328 305 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 PBX3P40426 434 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 PTPRCAPQ14761 206 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 TCEAL1Q15170 157 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 FAM117BQ6P1L5 589 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 GPRIN1Q7Z2K8 1008 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 ATPAF2Q8N5M1 289 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 INPP5DQ92835 1189 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 ESAMQ96AP7 390 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 ZNF560Q96MR9 790 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 DDX18Q9NVP1 670 aaKnown RBP13.74□□□□□ -0.21
GPC1-209ENST00000495100 CLIC5Q9NZA1 410 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 SOX13Q9UN79 622 aa13.74□□□□□ -0.21
GPC1-209ENST00000495100 CEP290O15078 2479 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 SIN3BO75182 1162 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 MT-ND1P03886 318 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ANPEPP15144 967 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 LILRA4P59901 499 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 RALGDSQ12967 914 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 FLOT2Q14254 428 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ACAP1Q15027 740 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
GPC1-209ENST00000495100 NRG4Q8WWG1 115 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 LENG8Q96PV6 779 aaPredicted RBP13.73□□□□□ -0.21
GPC1-209ENST00000495100 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 BCO2Q9BYV7 579 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 TCF7L2Q9NQB0 619 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 DSEQ9UL01 958 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 XPOTO43592 962 aaKnown RBP13.73□□□□□ -0.21
GPC1-209ENST00000495100 GLRA3O75311 464 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ATICP31939 592 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 RIPK1Q13546 671 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 FUT11Q495W5 492 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 CES4AQ5XG92 561 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 LRRC8EQ6NSJ5 796 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 GDPD5Q8WTR4 605 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 EPAS1Q99814 870 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
GPC1-209ENST00000495100 KCNK13Q9HB14 408 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 NMRAL1Q9HBL8 299 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 DONSONQ9NYP3 566 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 GIMAP2Q9UG22 337 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 SLC2A6Q9UGQ3 507 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 IPPQ9Y573 584 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 KIAA1217Q5T5P2 1943 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 SOCS7O14512 581 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ADCY6O43306 1168 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ZFXP17010 805 aaPredicted RBP13.73□□□□□ -0.21
GPC1-209ENST00000495100 GRM3Q14832 879 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ARMC3Q5W041 872 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 DRICH1Q6PGQ1 229 aaPredicted RBP13.73□□□□□ -0.21
GPC1-209ENST00000495100 GPR142Q7Z601 462 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 EFHBQ8N7U6 833 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 ARRDC4Q8NCT1 418 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 CEP70Q8NHQ1 597 aa13.73□□□□□ -0.21
GPC1-209ENST00000495100 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms