RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 UCNP55089 124 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 PCSK4Q6UW60 755 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 MMS22LQ6ZRQ5 1243 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 STK40Q8N2I9 435 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 SLC35F5Q8WV83 523 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 PTPRN2Q92932 1015 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 WBP1Q96G27 269 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 FCRL2Q96LA5 508 aaPredicted RBP18.27■□□□□ 0.52
NUP50-218ENST00000493456 LGMNQ99538 433 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 NUCKS1Q9H1E3 243 aaKnown RBP18.27■□□□□ 0.52
NUP50-218ENST00000493456 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 TLR6Q9Y2C9 796 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 J3QKU1 62 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 CETN3O15182 167 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 TBXAS1P24557 533 aaPredicted RBP18.26■□□□□ 0.51
NUP50-218ENST00000493456 DRD3P35462 400 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 NNMTP40261 264 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 PCBP4P57723 403 aaKnown RBP18.26■□□□□ 0.51
NUP50-218ENST00000493456 RHDQ02161 417 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 DNM1Q05193 864 aaKnown RBP18.26■□□□□ 0.51
NUP50-218ENST00000493456 KCNH2Q12809 1159 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 DPYDQ12882 1025 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 ZNF211Q13398 564 aaPredicted RBP18.26■□□□□ 0.51
NUP50-218ENST00000493456 CBWD6Q4V339 395 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 CBWD3Q5JTY5 395 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 CBWD5Q5RIA9 395 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 BROXQ5VW32 411 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 PMF1Q6P1K2 205 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 TRIM69Q86WT6 500 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 MYEOVQ96EZ4 313 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 HSFY1Q96LI6 401 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 ZNF578Q96N58 590 aaPredicted RBP18.26■□□□□ 0.51
NUP50-218ENST00000493456 SPAG5Q96R06 1193 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 CYTH4Q9UIA0 394 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 SLCO3A1Q9UIG8 710 aa18.26■□□□□ 0.51
NUP50-218ENST00000493456 PLRG1O43660 514 aaKnown RBP18.25■□□□□ 0.51
NUP50-218ENST00000493456 MT-CO3P00414 261 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 PAEPP09466 180 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 PRR29P0C7W0 189 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 SYKP43405 635 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 RGS7P49802 495 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 TMPRSS3P57727 454 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 SLC12A1Q13621 1099 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 STAT4Q14765 748 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 STILQ15468 1287 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 TAF1BQ53T94 588 aaPredicted RBP18.25■□□□□ 0.51
NUP50-218ENST00000493456 DCAF6Q58WW2 860 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 DCAF17Q5H9S7 520 aaPredicted RBP18.25■□□□□ 0.51
NUP50-218ENST00000493456 TCERG1LQ5VWI1 586 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.25■□□□□ 0.51
NUP50-218ENST00000493456 DSG4Q86SJ6 1040 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 LSMEM2Q8N112 164 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 UBR7Q8N806 425 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 DQX1Q8TE96 717 aaKnown RBP18.25■□□□□ 0.51
NUP50-218ENST00000493456 SLC39A13Q96H72 371 aa18.25■□□□□ 0.51
NUP50-218ENST00000493456 RPL10LQ96L21 214 aaKnown RBP18.25■□□□□ 0.51
NUP50-218ENST00000493456 M0QYV0 167 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 PIK3R2O00459 728 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 SIGLEC6O43699 453 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 GABBR2O75899 941 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 DAB2P98082 770 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 SULT2A1Q06520 285 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 SETMARQ53H47 684 aaPredicted RBP18.24■□□□□ 0.51
NUP50-218ENST00000493456 KDM7AQ6ZMT4 941 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 CFAP52Q8N1V2 620 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 CLEC4CQ8WTT0 213 aa18.24■□□□□ 0.51
NUP50-218ENST00000493456 ARID1BQ8NFD5 2236 aaPredicted RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 PRAMEF26H0Y7S4 382 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 SLC16A3O15427 465 aaKnown RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 SART1O43290 800 aaKnown RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 RNGTTO60942 597 aaKnown RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 SDC3O75056 442 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 DXOO77932 396 aaKnown RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 MOCS2O96007 188 aaPredicted RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 MAT2AP31153 395 aaKnown RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 STK19P49842 368 aaPredicted RBP18.23■□□□□ 0.51
NUP50-218ENST00000493456 CNGA2Q16280 664 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 FAM46CQ5VWP2 391 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 TMEM270Q6UE05 265 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 APCDD1Q8J025 514 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 LGI2Q8N0V4 545 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 OR4C6Q8NH72 309 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 TFAP2BQ92481 460 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 HIC2Q96JB3 615 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 TRIM62Q9BVG3 475 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 TJP2Q9UDY2 1190 aa18.23■□□□□ 0.51
NUP50-218ENST00000493456 FAM237AA0A1B0GTK4 181 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 TRIM38O00635 465 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 RTN2O75298 545 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 APOEP02649 317 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 FYNP06241 537 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 VASPP50552 380 aaPredicted RBP18.22■□□□□ 0.51
NUP50-218ENST00000493456 ERVPABLB-1P60509 514 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 NUCB2P80303 420 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 AGBL4Q5VU57 503 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 BEND5Q7L4P6 421 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 CHSY1Q86X52 802 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 OR8D1Q8WZ84 308 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms