RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CHD5Q8TDI0 1954 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 ILVBLA1L0T0 632 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 MFSD11O43934 449 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 RAMP2O60895 175 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 SLC12A1Q13621 1099 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 PARP15Q460N3 678 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 AFMIDQ63HM1 303 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 CXorf57Q6NSI4 855 aaKnown RBP19.12■□□□□ 0.65
MCF2L-230ENST00000491028 NPWQ8N729 165 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 CAPZA3Q96KX2 299 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 ASB2Q96Q27 587 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 FRMD8P1Q9BZ68 369 aaPredicted RBP19.12■□□□□ 0.65
MCF2L-230ENST00000491028 NDFIP2Q9NV92 336 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 MFHAS1Q9Y4C4 1052 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 MRFAP1Q9Y605 127 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 MYOFQ9NZM1 2061 aa19.12■□□□□ 0.65
MCF2L-230ENST00000491028 PRUNE2Q8WUY3 3088 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 C19orf67A6NJJ6 358 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 NCAM2O15394 837 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 ASGR2P07307 311 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 EIF2DP41214 584 aaKnown RBP19.11■□□□□ 0.65
MCF2L-230ENST00000491028 PFKPQ01813 784 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 GBE1Q04446 702 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 CKAP4Q07065 602 aaKnown RBP19.11■□□□□ 0.65
MCF2L-230ENST00000491028 TDGQ13569 410 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 NOMO1Q15155 1222 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 WHAMMP3Q1A5X7 153 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 GAB4Q2WGN9 574 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 ARHGAP12Q8IWW6 846 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 ETFBKMTQ8IXQ9 262 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 MAGEH1Q9H213 219 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 LRRC19Q9H756 370 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 HOMER3Q9NSC5 361 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 GTSE1Q9NYZ3 720 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 DTLQ9NZJ0 730 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 KIAA1522Q9P206 1035 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-230ENST00000491028 FBXO10Q9UK96 956 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 HEY1Q9Y5J3 304 aa19.11■□□□□ 0.65
MCF2L-230ENST00000491028 GOLGA6L10A0A0M3HER8 536 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 TCRBV7S2A1N4TA0A589 114 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 OTOL1A6NHN0 477 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-230ENST00000491028 ARHGAP42A6NI28 874 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 SRFP11831 508 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 PECAM1P16284 738 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-230ENST00000491028 MX2P20592 715 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 GJA4P35212 333 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 OTUD4Q01804 1114 aaKnown RBP19.1■□□□□ 0.65
MCF2L-230ENST00000491028 GNA12Q03113 381 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 SIX1Q15475 284 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-230ENST00000491028 C1orf228Q6PIY5 440 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 NPNTQ6UXI9 565 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 LRRC49Q8IUZ0 686 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.1■□□□□ 0.65
MCF2L-230ENST00000491028 ACTL9Q8TC94 416 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 WFDC5Q8TCV5 224 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 OLFM3Q96PB7 478 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 NOL6Q9H6R4 1146 aaKnown RBP19.1■□□□□ 0.65
MCF2L-230ENST00000491028 SLC2A4RGQ9NR83 387 aa19.1■□□□□ 0.65
MCF2L-230ENST00000491028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 RASA4BC9J798 803 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 PPP1R12AO14974 1030 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 RASA4O43374 803 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 BMP1P13497 986 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 DGKGP49619 791 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 GALNT2Q10471 571 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 XRCC4Q13426 336 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 POLD3Q15054 466 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 PDK1Q15118 436 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 PREPLQ4J6C6 727 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 FSCBQ5H9T9 825 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 ADAT2Q7Z6V5 191 aaKnown RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 ARHGEF2Q92974 986 aaKnown RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 HAUS1Q96CS2 278 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 MSANTD3Q96H12 275 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 CELF6Q96J87 481 aaKnown RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 LMLNQ96KR4 655 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 SLC39A8Q9C0K1 460 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 BRD8Q9H0E9 1235 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 DNAJC17Q9NVM6 304 aaKnown RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 SMARCAL1Q9NZC9 954 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 CLEC4EQ9ULY5 219 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 DUSP12Q9UNI6 340 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 SLC27A6Q9Y2P4 619 aa19.09■□□□□ 0.65
MCF2L-230ENST00000491028 NYNRINQ9P2P1 1898 aaKnown RBP19.09■□□□□ 0.65
MCF2L-230ENST00000491028 MIA3Q5JRA6 1907 aa19.08■□□□□ 0.65
MCF2L-230ENST00000491028 SPTBN5Q9NRC6 3674 aaKnown RBP19.08■□□□□ 0.65
MCF2L-230ENST00000491028 HACD1B0YJ81 288 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 KRIT1O00522 736 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 MCF2LO15068 1137 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 TULP3O75386 442 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 ZNF189O75820 626 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-230ENST00000491028 HLA-FP30511 346 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 CSKP41240 450 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 PLK1P53350 603 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 ZNF33AQ06730 810 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 LMAN2Q12907 356 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 SLC10A2Q12908 348 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-230ENST00000491028 DMC1Q14565 340 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 CCNG2Q16589 344 aa19.08■□□□□ 0.64
MCF2L-230ENST00000491028 RNF219Q5W0B1 726 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms