RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ABHD10Q9NUJ1 306 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 MPP6Q9NZW5 540 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 MYO1AQ9UBC5 1043 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 OR51B4Q9Y5P0 310 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 SSU72P8A0A1W2PR75 194 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 AKR1B15C9JRZ8 316 aaPredicted RBP17.83■□□□□ 0.45
MDC1-206ENST00000489540 DCLK1O15075 740 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 AP5Z1O43299 807 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 MFAP3LO75121 409 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 RNF8O76064 485 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 RHOCP08134 193 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 HLA-EP13747 358 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 OR1E1P30953 314 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 VASPP50552 380 aaPredicted RBP17.83■□□□□ 0.45
MDC1-206ENST00000489540 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.45
MDC1-206ENST00000489540 MAP7D1Q3KQU3 841 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 PLK5Q496M5 336 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 EFHC2Q5JST6 749 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 ARTNQ5T4W7 220 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 OR2T3Q8NH03 318 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 ERLEC1Q96DZ1 483 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 ALG14Q96F25 216 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 MRGPRX3Q96LB0 322 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 MUC3BQ9H195 1237 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 PRDM16Q9HAZ2 1276 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 VPS28Q9UK41 221 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 INVSQ9Y283 1065 aa17.83■□□□□ 0.45
MDC1-206ENST00000489540 MYO18AQ92614 2054 aaKnown RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 MAP3K13O43283 966 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 L1CAMP32004 1257 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 CTSOP43234 321 aaPredicted RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 ADKP55263 362 aaKnown RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 KRT83P78385 493 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 TBX2Q13207 712 aaPredicted RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 ACAP1Q15027 740 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 SLC18A3Q16572 532 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 MANEALQ5VSG8 457 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 ZNF783Q6ZMS7 281 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 GPR161Q8N6U8 529 aaKnown RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 OR52K2Q8NGK3 314 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 RLN3Q8WXF3 142 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 PRCCQ92733 491 aaPredicted RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 SIPA1Q96FS4 1042 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 MYO19Q96H55 970 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 MKRN2Q9H000 416 aaKnown RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 THAP2Q9H0W7 228 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 DUSP15Q9H1R2 295 aaPredicted RBP17.82■□□□□ 0.44
MDC1-206ENST00000489540 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 PRSS16Q9NQE7 514 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 FZD10Q9ULW2 581 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 FANCMQ8IYD8 2048 aa17.82■□□□□ 0.44
MDC1-206ENST00000489540 ILVBLA1L0T0 632 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 TARSL2A2RTX5 802 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 LRIG2O94898 1065 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 CYP1A2P05177 515 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 RHOQP17081 205 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 COPAP53621 1224 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 ASTE1Q2TB18 679 aaPredicted RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 HNRNPA1L2Q32P51 320 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 RWDD4Q6NW29 188 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 KIAA1324Q6UXG2 1013 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 SLC36A4Q6YBV0 504 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 TFAP2DQ7Z6R9 452 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 GAS2L3Q86XJ1 694 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 TBC1D31Q96DN5 1066 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 CCDC42Q96M95 316 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 C2orf49Q9BVC5 232 aaPredicted RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 ITM2CQ9NQX7 267 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 SLCO3A1Q9UIG8 710 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 GPR179Q6PRD1 2367 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 EIF3CLB5ME19 914 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 FAM72CH0Y354 149 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 C7P10643 843 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 ACADMP11310 421 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 GALCP54803 685 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 ZBTB16Q05516 673 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 GFPT1Q06210 699 aaPredicted RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 SPDYCQ5MJ68 293 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 FAM72AQ5TYM5 149 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 FAM72DQ6L9T8 149 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 LPCAT2Q7L5N7 544 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 FAM72BQ86X60 149 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 ZNF366Q8N895 744 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 MRFAP1L1Q96HT8 127 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 RPL10LQ96L21 214 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 EIF3CQ99613 913 aaKnown RBP17.81■□□□□ 0.44
MDC1-206ENST00000489540 EPAS1Q99814 870 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 MAGEB5Q9BZ81 275 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 TRIM7Q9C029 511 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 SLC6A17Q9H1V8 727 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 ZNF212Q9UDV6 495 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 SLC25A13Q9UJS0 675 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 NENFQ9UMX5 172 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 PCDHGA5Q9Y5G8 931 aa17.81■□□□□ 0.44
MDC1-206ENST00000489540 EDDM13A0A1B0GTR0 161 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 TTC34A8MYJ7 566 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 AKR1B10O60218 316 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 PRPSAP2O60256 369 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 LRP3O75074 770 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms