RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 LIASO43766 372 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 TBX10O75333 385 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ABLIM3O94929 683 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ARSEP51690 589 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 DAOAP59103 153 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 GPS1Q13098 491 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 RAB33AQ14088 237 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 EDEM1Q92611 657 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 KLF6Q99612 283 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 FOXP3Q9BZS1 431 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 SLC17A7Q9P2U7 560 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 UNC80Q8N2C7 3258 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 A0A0G2JND7 137 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 C2orf71A6NGG8 1288 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 C2CD4BA6NLJ0 364 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 GOLGA8MH3BSY2 632 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 GOLGA8RI6L899 631 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 CAPN9O14815 690 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 ALOX15BO15296 676 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 TGM5O43548 720 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PSMG1O95456 288 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 MAGEA11P43364 429 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 GPX6P59796 221 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 GAD2Q05329 585 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 GPM6BQ13491 265 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 FYB2Q5VWT5 728 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 SLC26A9Q7LBE3 791 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 KATNAL2Q8IYT4 538 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 NUP93Q8N1F7 819 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PTPRN2Q92932 1015 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 TTC25Q96NG3 672 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 SLC28A3Q9HAS3 691 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 CNGB3Q9NQW8 809 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 FBXO6Q9NRD1 293 aaPredicted RBP13.65□□□□□ -0.22
CHD1L-208ENST00000488864 CPSF2Q9P2I0 782 aaKnown RBP13.65□□□□□ -0.22
CHD1L-208ENST00000488864 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 MSRAQ9UJ68 235 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 ZNF148Q9UQR1 794 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 LRCH1Q9Y2L9 728 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 SMAPO00193 183 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PSTPIP1O43586 416 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 CCDC22O60826 627 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 ERVK-21P61565 698 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
CHD1L-208ENST00000488864 LMNB2Q03252 620 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
CHD1L-208ENST00000488864 DCAF6Q58WW2 860 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 SYPL2Q5VXT5 272 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 LRRC74BQ6ZQY2 392 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 DENND5BQ6ZUT9 1274 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 BHLHA9Q7RTU4 235 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 MRPL43Q8N983 215 aaKnown RBP13.65□□□□□ -0.22
CHD1L-208ENST00000488864 C8orf48Q96LL4 319 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PNPLA8Q9NP80 782 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHD1L-208ENST00000488864 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.65□□□□□ -0.225e-6■■□□□ 12.1
CHD1L-208ENST00000488864 SENP1Q9P0U3 644 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 NUDT5Q9UKK9 219 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 LZTS1Q9Y250 596 aa13.65□□□□□ -0.22
CHD1L-208ENST00000488864 PRUNE2Q8WUY3 3088 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 SYNJ2BP-COX16A0A087WUM0 186 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 RFXAPO00287 272 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 PER2O15055 1255 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 HAUS5O94927 633 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 GPD1P21695 349 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 SLC34A1Q06495 639 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 RBM23Q86U06 439 aaKnown RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 KBTBD2Q8IY47 623 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 ADAM32Q8TC27 787 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 TCP10LQ8TDR4 215 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 HAUS1Q96CS2 278 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 NSL1Q96IY1 281 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 KLHL5Q96PQ7 755 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 VCXQ9H320 206 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 COX16Q9P0S2 106 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 FNIP2Q9P278 1114 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 PSMC3IPQ9P2W1 217 aaPredicted RBP13.64□□□□□ -0.23
CHD1L-208ENST00000488864 USP3Q9Y6I4 520 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 CLUHO75153 1309 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 GYG2O15488 501 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 FBXO21O94952 628 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 FYNP06241 537 aa13.64□□□□□ -0.23
CHD1L-208ENST00000488864 RB1P06400 928 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms