RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PROCP04070 461 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 CHRNGP07510 517 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PTPN1P18031 435 aaKnown RBP12.98□□□□□ -0.33
CLIC4-202ENST00000488683 ATP6V1C1P21283 382 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 FDFT1P37268 417 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 ACADSBP45954 432 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PGFP49763 221 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 TAF6P49848 677 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 SLC9B1Q4ZJI4 515 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 EFHC1Q5JVL4 640 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 RPS27LQ71UM5 84 aaKnown RBP12.98□□□□□ -0.33
CLIC4-202ENST00000488683 BNIPLQ7Z465 357 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 LIMS2Q7Z4I7 341 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF467Q7Z7K2 595 aaPredicted RBP12.98□□□□□ -0.33
CLIC4-202ENST00000488683 SIX6OS1Q8N1H7 587 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 NPY6RQ99463 290 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PTPN18Q99952 460 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 WWP1Q9H0M0 922 aa12.98□□□□□ -0.33
CLIC4-202ENST00000488683 WDR55Q9H6Y2 383 aaPredicted RBP12.98□□□□□ -0.33
CLIC4-202ENST00000488683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SPECC1L-ADORA2AF8WAN1 911 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 BIRC5O15392 142 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 PTPN3P26045 913 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 CD68P34810 354 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 CLCNKBP51801 687 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 RNF148Q8N7C7 305 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 APBB2Q92870 758 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NT5C3BQ969T7 300 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 DUSP16Q9BY84 665 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 IARS2Q9NSE4 1012 aaKnown RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 DDIT4Q9NX09 232 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 TXNDC16Q9P2K2 825 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 TAGLN3Q9UI15 199 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 MBLAC1A4D2B0 266 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 HACD1B0YJ81 288 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SIN3BO75182 1162 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 DAB1O75553 588 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 MT-CYBP00156 380 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 CD4P01730 458 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 MLNP12872 115 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 PGAM1P18669 254 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NFKB1P19838 968 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NMBRP28336 390 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 GCKP35557 465 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 IDH3AP50213 366 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 DPYSQ14117 519 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 GRB14Q14449 540 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NOMO2Q5JPE7 1267 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 LPCAT4Q643R3 524 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 FSTL4Q6MZW2 842 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 RNF111Q6ZNA4 994 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 RAPH1Q70E73 1250 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 CYS1Q717R9 158 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 PIWIL2Q8TC59 973 aaKnown RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 CERS2Q96G23 380 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF560Q96MR9 790 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 MLPHQ9BV36 600 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 ABHD16BQ9H3Z7 469 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 THAP1Q9NVV9 213 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 TTC24A2A3L6 582 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 TK2O00142 265 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 STRNO43815 780 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 ZBTB14O43829 449 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 OPHN1O60890 802 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 TOMM70O94826 608 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 F2P00734 622 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NPR3P17342 541 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 VHLP40337 213 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 GLUD2P49448 558 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 XKR4Q5GH76 650 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NAIF1Q69YI7 327 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 HPS6Q86YV9 775 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 ZMIZ2Q8NF64 920 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SGF29Q96ES7 293 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 GAD1Q99259 594 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 HNRNPABQ99729 332 aaKnown RBP12.97□□□□□ -0.33
CLIC4-202ENST00000488683 SMOQ99835 787 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 FIS1Q9Y3D6 152 aa12.97□□□□□ -0.33
CLIC4-202ENST00000488683 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 A0A088AWK7 358 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 DCLK1O15075 740 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 AP1G2O75843 785 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 STK10O94804 968 aaKnown RBP12.96□□□□□ -0.33
CLIC4-202ENST00000488683 JCHAINP01591 159 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 JUNP05412 331 aaKnown RBP12.96□□□□□ -0.33
CLIC4-202ENST00000488683 KCNE1P15382 129 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 SERPINB5P36952 375 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 KYAT3Q6YP21 454 aaKnown RBP12.96□□□□□ -0.33
CLIC4-202ENST00000488683 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms