RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ZFYVE27Q5T4F4 411 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 RNF219Q5W0B1 726 aaPredicted RBP15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 EGFLAMQ63HQ2 1017 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 MBLAC2Q68D91 279 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 REXO1L1PQ8IX06 675 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 RHOT1Q8IXI2 618 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 FBXL6Q8N531 539 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 RTL3Q8N8U3 475 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 KCTD6Q8NC69 237 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 FAM71BQ8TC56 605 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 KIAA1524Q8TCG1 905 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 TSC1Q92574 1164 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 KRT35Q92764 455 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 CALR3Q96L12 384 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 CIPCQ9C0C6 399 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 NOL6Q9H6R4 1146 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 POLR3BQ9NW08 1133 aaPredicted RBP15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 DLGAP2Q9P1A6 1054 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 OR51B4Q9Y5P0 310 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 KMT2EQ8IZD2 1858 aa15.91■□□□□ 0.14
RPUSD3-217ENST00000485705 SHROOM3Q8TF72 1996 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 WASH4PA8MWX3 477 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 H3BRJ5 948 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 GPR37L1O60883 481 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 FTCDO95954 541 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 ERCC2P18074 760 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 TIE1P35590 1138 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 CTSOP43234 321 aaPredicted RBP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 DPYSQ14117 519 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 DPYSL3Q14195 570 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 LRRC32Q14392 662 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 PLEKHG6Q3KR16 790 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 C2orf27AQ580R0 203 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 LRRC38Q5VT99 294 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 SETD3Q86TU7 594 aaPredicted RBP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 NT5DC3Q86UY8 548 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 AHI1Q8N157 1196 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 RNF10Q8N5U6 811 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 ZNF557Q8N988 423 aaPredicted RBP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 NETO2Q8NC67 525 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 OR7D4Q8NG98 312 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 WFIKKN2Q8TEU8 576 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 USP33Q8TEY7 942 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 CYB5D2Q8WUJ1 264 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 PSMB7Q99436 277 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 FEM1AQ9BSK4 669 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 CATSPERBQ9H7T0 1116 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 ETNK2Q9NVF9 386 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 C2orf42Q9NWW7 574 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 ELOVL2Q9NXB9 296 aa15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 TRMT1Q9NXH9 659 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
RPUSD3-217ENST00000485705 NYNRINQ9P2P1 1898 aaKnown RBP15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 LRRD1A4D1F6 860 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 C3orf70A6NLC5 250 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 PRR33A8MZF0 331 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 NCAM2O15394 837 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 FGF10O15520 208 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 DAPK3O43293 454 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 PSTPIP1O43586 416 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 KRT1P04264 644 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 KDELR1P24390 212 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 HTR7P34969 479 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 ARL4AP40617 200 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 HCAR3P49019 387 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 MAPKAPK2P49137 400 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 PLK1P53350 603 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 FBXO43Q4G163 708 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 TMEM31Q5JXX7 168 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 C6orf118Q5T5N4 469 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 CCDC33Q8N5R6 958 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 RPLP0P6Q8NHW5 317 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 RNF25Q96BH1 459 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 ACOX2Q99424 681 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 CALN1Q9BXU9 219 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 KLC2Q9H0B6 622 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 MUC3BQ9H195 1237 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 CHRDQ9H2X0 955 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 PACSIN2Q9UNF0 486 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 STARD13Q9Y3M8 1113 aa15.89■□□□□ 0.13
RPUSD3-217ENST00000485705 MUC22E2RYF6 1773 aaPredicted RBP15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 ILVBLA1L0T0 632 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 USP27XA6NNY8 438 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 DCLK1O15075 740 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 SNAP91O60641 907 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 POLR2EP19388 210 aaKnown RBP15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 GLDCP23378 1020 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 AVPR2P30518 371 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 ACVRL1P37023 503 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 WASP42768 502 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 RPS9P46781 194 aaKnown RBP15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 ZNF135P52742 658 aaPredicted RBP15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 OXCT1P55809 520 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 GNA12Q03113 381 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 MTAPQ13126 283 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 SLC12A1Q13621 1099 aa15.88■□□□□ 0.13
RPUSD3-217ENST00000485705 PDK2Q15119 407 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms