RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ADH1BP00325 375 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 MT-CO3P00414 261 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 FYNP06241 537 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 VAV1P15498 845 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 NNMTP40261 264 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 NUMBP49757 651 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 STK19P49842 368 aaPredicted RBP13.25□□□□□ -0.29
TMEM54-206ENST00000482771 PPP2CBP62714 309 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 PPP2CAP67775 309 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 CXADRP78310 365 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 NUCB2P80303 420 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 E2F1Q01094 437 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 CFHR1Q03591 330 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 TLE3Q04726 772 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 STAT4Q14765 748 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
TMEM54-206ENST00000482771 NAPEPLDQ6IQ20 393 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 KDM7AQ6ZMT4 941 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 SPACA3Q8IXA5 215 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
TMEM54-206ENST00000482771 LGI2Q8N0V4 545 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 OXR1Q8N573 874 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 DCBLD1Q8N8Z6 715 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 TPX2Q9ULW0 747 aaKnown RBP13.25□□□□□ -0.29
TMEM54-206ENST00000482771 NAALADL1Q9UQQ1 740 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
TMEM54-206ENST00000482771 MAST4O15021 2626 aa13.25□□□□□ -0.29
TMEM54-206ENST00000482771 NAV2Q8IVL1 2488 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 RNF225M0QZC1 329 aaPredicted RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 TRIM38O00635 465 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 RTN2O75298 545 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 CALCAP01258 141 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 ACP1P24666 158 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 MZF1P28698 734 aaPredicted RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 DRD3P35462 400 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 METAP1P53582 386 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 PCSK4Q6UW60 755 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 ERICH1Q86X53 443 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 UBR7Q8N806 425 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 RFFLQ8WZ73 363 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 SLC39A13Q96H72 371 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 NAF1Q96HR8 494 aaKnown RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 HSFY1Q96LI6 401 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 ZSWIM1Q9BR11 485 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 CYTH4Q9UIA0 394 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 XPO7Q9UIA9 1087 aaKnown RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 PCDHB4Q9Y5E5 795 aa13.24□□□□□ -0.29
TMEM54-206ENST00000482771 MUC22E2RYF6 1773 aaPredicted RBP13.24□□□□□ -0.29
TMEM54-206ENST00000482771 ITIH6Q6UXX5 1313 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 M0QYV0 167 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 FBXO21O94952 628 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 PAEPP09466 180 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
TMEM54-206ENST00000482771 BRD2P25440 801 aaKnown RBP13.23□□□□□ -0.29
TMEM54-206ENST00000482771 OVGP1Q12889 678 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 ZNF211Q13398 564 aaPredicted RBP13.23□□□□□ -0.29
TMEM54-206ENST00000482771 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
TMEM54-206ENST00000482771 POM121L1PQ3SYA9 428 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 TAF1BQ53T94 588 aaPredicted RBP13.23□□□□□ -0.29
TMEM54-206ENST00000482771 ZC3H12AQ5D1E8 599 aaKnown RBP13.23□□□□□ -0.29
TMEM54-206ENST00000482771 RAP1GAP2Q684P5 730 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 KRBA2Q6ZNG9 492 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 IQCHQ86VS3 1027 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 KLHDC7BQ96G42 594 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 SPATA32Q96LK8 384 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 SERPINB11Q96P15 392 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 KDM4CQ9H3R0 1056 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 SARDHQ9UL12 918 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 CA5BQ9Y2D0 317 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 PCDHB1Q9Y5F3 818 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 COL6A6A6NMZ7 2263 aa13.23□□□□□ -0.29
TMEM54-206ENST00000482771 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 PDGFRAP16234 1089 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 TACR2P21452 398 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 NUDT1P36639 197 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 DAB2P98082 770 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 ACCSLQ4AC99 568 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 SYPL2Q5VXT5 272 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 FRS2Q8WU20 508 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 SNX21Q969T3 373 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 FAM149B1Q96BN6 582 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 SPAG5Q96R06 1193 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 LGMNQ99538 433 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 TJP2Q9UDY2 1190 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 DMTF1Q9Y222 760 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 SPTA1P02549 2419 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
TMEM54-206ENST00000482771 TENM4Q6N022 2769 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 MYO18BQ8IUG5 2567 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 CAPN8A6NHC0 703 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms