RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FUT11Q495W5 492 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 C5orf22Q49AR2 442 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 ACBD5Q5T8D3 534 aaPredicted RBP13.59□□□□□ -0.23
HDAC1-208ENST00000482310 DCAF12L1Q5VU92 463 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
HDAC1-208ENST00000482310 SPOCD1Q6ZMY3 1216 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 NLRP14Q86W24 1093 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
HDAC1-208ENST00000482310 RTL3Q8N8U3 475 aaKnown RBP13.59□□□□□ -0.23
HDAC1-208ENST00000482310 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 SORCS1Q8WY21 1168 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 TSC1Q92574 1164 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 HAUS1Q96CS2 278 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 SPON2Q9BUD6 331 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 MAK16Q9BXY0 300 aaKnown RBP13.59□□□□□ -0.23
HDAC1-208ENST00000482310 CIPCQ9C0C6 399 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 TBC1D17Q9HA65 648 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 TRPV5Q9NQA5 729 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 RBM12Q9NTZ6 932 aaKnown RBP13.59□□□□□ -0.23
HDAC1-208ENST00000482310 TMEM248Q9NWD8 314 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 WDFY4Q6ZS81 3184 aa13.59□□□□□ -0.23
HDAC1-208ENST00000482310 A0A0D9SEW6 157 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 TBC1D3BA6NDS4 549 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 MIF4GDA9UHW6 222 aaKnown RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 DFFAO00273 331 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 KCNK3O14649 394 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 MFSD11O43934 449 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 KAT7O95251 611 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 PDGFBP01127 241 aaPredicted RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 ATP1A1P05023 1023 aaKnown RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 PYGMP11217 842 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 IL4RP24394 825 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 HOXC13P31276 330 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 ACVRL1P37023 503 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 MPP7Q5T2T1 576 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 C6orf118Q5T5N4 469 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 SEL1L2Q5TEA6 688 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 C1orf228Q6PIY5 440 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 TMCO3Q6UWJ1 677 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 NPNTQ6UXI9 565 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 LEKR1Q6ZMV7 388 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 TP53INP2Q8IXH6 220 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 RCOR2Q8IZ40 523 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 NPWQ8N729 165 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 EXD1Q8NHP7 514 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 PCDH19Q8TAB3 1148 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 FIBINQ8TAL6 211 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 CYB5D2Q8WUJ1 264 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 LRRN4Q8WUT4 740 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 HES6Q96HZ4 224 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 C16orf45Q96MC5 204 aaPredicted RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 WDR24Q96S15 920 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 KIAA1522Q9P206 1035 aaPredicted RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 WNT16Q9UBV4 365 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 VPS28Q9UK41 221 aa13.58□□□□□ -0.24
HDAC1-208ENST00000482310 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
HDAC1-208ENST00000482310 SHISA7A6NL88 538 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 PRRT4C9JH25 899 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 APOL1O14791 398 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 DCLK1O15075 740 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 RAMP2O60895 175 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 CISD3P0C7P0 127 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 GLDCP23378 1020 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 MSNP26038 577 aaKnown RBP13.57□□□□□ -0.24
HDAC1-208ENST00000482310 TARSP26639 723 aaKnown RBP13.57□□□□□ -0.24
HDAC1-208ENST00000482310 HTR7P34969 479 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 CDKN2BP42772 138 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
HDAC1-208ENST00000482310 MAPKAPK2P49137 400 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 PEX5P50542 639 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 PRKCQQ04759 706 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDAC1-208ENST00000482310 PITRM1Q5JRX3 1037 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 CCDC181Q5TID7 509 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 IL31Q6EBC2 164 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 ZNF852Q6ZMS4 543 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 B4GALNT4Q76KP1 1039 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 ADAT2Q7Z6V5 191 aaKnown RBP13.57□□□□□ -0.24
HDAC1-208ENST00000482310 PHTF2Q8N3S3 785 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 PQLC3Q8N755 202 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 TERB1Q8NA31 727 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 EDAQ92838 391 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 HMCESQ96FZ2 354 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 RNF157Q96PX1 679 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 TLR10Q9BXR5 811 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 ZNF212Q9UDV6 495 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
HDAC1-208ENST00000482310 hCG_1818297A0A087WSY0 165 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms