RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CFAP69A5D8W1 941 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 SLC9A3R1O14745 358 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 KCNN4O15554 427 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 KRT14P02533 472 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 STIP1P31948 543 aaKnown RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 GARSP41250 739 aaKnown RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 AP1B1Q10567 949 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 PPP1R7Q15435 360 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 ELF2Q15723 593 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 TPGS1Q6ZTW0 290 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 SYDE1Q6ZW31 735 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 PRUNE1Q86TP1 453 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 GPR161Q8N6U8 529 aaKnown RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 FAM71DQ8N9W8 422 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 ST13P5Q8NFI4 369 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 BPIFB1Q8TDL5 484 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 DDI1Q8WTU0 396 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 OTUB2Q96DC9 234 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 P2RY11Q96G91 374 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 NECTIN4Q96NY8 510 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 BRD8Q9H0E9 1235 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 NEU2Q9Y3R4 380 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 USP15Q9Y4E8 981 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-206ENST00000480362 WNT6Q9Y6F9 365 aa18.03■□□□□ 0.48
UPF3A-206ENST00000480362 UQCRHLA0A096LP55 91 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 TARSL2A2RTX5 802 aaKnown RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 HEPACAM2A8MVW5 462 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 RASA4BC9J798 803 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 H3BQ06 376 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 RASA4O43374 803 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 RAMP2O60895 175 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 IFNB1P01574 187 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 UQCRHP07919 91 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 LAMP2P13473 410 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 ETS1P14921 441 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 VAV1P15498 845 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 FCARP24071 287 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 PAPOLAP51003 745 aaKnown RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 TERF1P54274 439 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 GDF10P55107 478 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 YBEYP58557 167 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 GUCY2DQ02846 1103 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 PPIDQ08752 370 aaKnown RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 PTK6Q13882 451 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 POLD3Q15054 466 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 PRKD1Q15139 912 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 TRIP13Q15645 432 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 MPP7Q5T2T1 576 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 TANGO2Q6ICL3 276 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 ADGRG2Q8IZP9 1017 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 CARNMT1Q8N4J0 409 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 KIAA1958Q8N8K9 716 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 GLIS1Q8NBF1 620 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 DEPDC1BQ8WUY9 529 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 BHMTQ93088 406 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 HDAC11Q96DB2 347 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 ERP44Q9BS26 406 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 ZFP14Q9HCL3 533 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 EPB41L5Q9HCM4 733 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 DUS2Q9NX74 493 aaKnown RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 OBP2AQ9NY56 170 aa18.02■□□□□ 0.48
UPF3A-206ENST00000480362 UTP11Q9Y3A2 253 aaKnown RBP18.02■□□□□ 0.48
UPF3A-206ENST00000480362 ZSCAN5CA6NGD5 496 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-206ENST00000480362 ARHGAP42A6NI28 874 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 H0Y626 953 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 CYBBP04839 570 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 ZSCAN5DPP0CG00 497 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 SKIV2LQ15477 1246 aaKnown RBP18.01■□□□□ 0.47
UPF3A-206ENST00000480362 C6orf118Q5T5N4 469 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 HEATR6Q6AI08 1181 aaKnown RBP18.01■□□□□ 0.47
UPF3A-206ENST00000480362 ARHGAP36Q6ZRI8 547 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 SETD3Q86TU7 594 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-206ENST00000480362 TMEM25Q86YD3 366 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 ATPAF2Q8N5M1 289 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 CCDC89Q8N998 374 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 OR52K2Q8NGK3 314 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 HTR3CQ8WXA8 447 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 SUSD6Q92537 303 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 IRF7Q92985 503 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 HMCESQ96FZ2 354 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 GUCD1Q96NT3 240 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 TRIM31Q9BZY9 425 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 RAB17Q9H0T7 212 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 MAGEH1Q9H213 219 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 SPHK2Q9NRA0 654 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 PLK2Q9NYY3 685 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 TBC1D30Q9Y2I9 924 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 NUP205Q92621 2012 aa18.01■□□□□ 0.47
UPF3A-206ENST00000480362 ILVBLA1L0T0 632 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 GRXCR2A6NFK2 248 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 BHMG1C9JSJ3 638 aaPredicted RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 MAFKO60675 156 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 LUC7L3O95232 432 aaKnown RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 RHOCP08134 193 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 FOSL2P15408 326 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 KCNA5P22460 613 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 CCNCP24863 283 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 HOXD9P28356 352 aaPredicted RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 ACVRL1P37023 503 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms