RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RHOCP08134 193 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 POLR2EP19388 210 aaKnown RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 CSKP41240 450 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 SSR1P43307 286 aaKnown RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 CCR3P51677 355 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 TAS2R40P59535 323 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 SMTNL2Q2TAL5 461 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 C2orf27AQ580R0 203 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 MBLAC2Q68D91 279 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 SYT13Q7L8C5 426 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 CPNE8Q86YQ8 564 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 RTL3Q8N8U3 475 aaKnown RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 OR52K2Q8NGK3 314 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 TPCN2Q8NHX9 752 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 HSPH1Q92598 858 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 ALG14Q96F25 216 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 FEM1AQ9BSK4 669 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 RCOR3Q9P2K3 495 aaPredicted RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 THAP10Q9P2Z0 257 aaPredicted RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 MMP17Q9ULZ9 603 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 OR51B4Q9Y5P0 310 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 DUSP10Q9Y6W6 482 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 DLDP09622 509 aaKnown RBP20.27■□□□□ 0.84
LIME1-205ENST00000480139 CCDC175P0C221 793 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 TIE1P35590 1138 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 SULT2A1Q06520 285 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 ENPP2Q13822 863 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 PPP6R3Q5H9R7 873 aaPredicted RBP20.27■□□□□ 0.84
LIME1-205ENST00000480139 EMC10Q5UCC4 262 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 EGFLAMQ63HQ2 1017 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 PKN3Q6P5Z2 889 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 ZNF662Q6ZS27 426 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 RFX8Q6ZV50 586 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 ALLCQ8N6M5 410 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 KDM1BQ8NB78 822 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 TSC1Q92574 1164 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 PRRX2Q99811 253 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 TSGA10Q9BZW7 698 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 CIPCQ9C0C6 399 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 PRMT8Q9NR22 394 aaPredicted RBP20.27■□□□□ 0.84
LIME1-205ENST00000480139 SPATA6Q9NWH7 488 aaPredicted RBP20.27■□□□□ 0.84
LIME1-205ENST00000480139 ALG6Q9Y672 507 aa20.27■□□□□ 0.84
LIME1-205ENST00000480139 ATG2BQ96BY7 2078 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 ANTXRLA6NF34 631 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 H3BRJ5 948 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 GALR2O43603 387 aaPredicted RBP20.26■□□□□ 0.83
LIME1-205ENST00000480139 GOT1P17174 413 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 COMTP21964 271 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 MZF1P28698 734 aaPredicted RBP20.26■□□□□ 0.83
LIME1-205ENST00000480139 NTSR1P30989 418 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 ETFBP38117 255 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 ARL4AP40617 200 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 ARSEP51690 589 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 PDK2Q15119 407 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 IFI16Q16666 785 aaKnown RBP20.26■□□□□ 0.83
LIME1-205ENST00000480139 EOGTQ5NDL2 527 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 RNF219Q5W0B1 726 aaPredicted RBP20.26■□□□□ 0.83
LIME1-205ENST00000480139 C1orf210Q8IVY1 113 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 APCDD1Q8J025 514 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 GABRG3Q99928 467 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 PCDH18Q9HCL0 1135 aa20.26■□□□□ 0.83
LIME1-205ENST00000480139 CWC15Q9P013 229 aaKnown RBP20.26■□□□□ 0.83
LIME1-205ENST00000480139 MYO18AQ92614 2054 aaKnown RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 CXorf51AA0A1B0GTR3 108 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 BUB1O43683 1085 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 SPOPO43791 374 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 KLF8O95600 359 aaPredicted RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 PTMAP06454 111 aaKnown RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 SRPRAP08240 638 aaKnown RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 CXCL12P48061 93 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 VASPP50552 380 aaPredicted RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 GNA12Q03113 381 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 DPYSQ14117 519 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 ZNF234Q14588 700 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 PTPRNQ16849 979 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 SDE2Q6IQ49 451 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 DAAM2Q86T65 1068 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 VSIG1Q86XK7 387 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 MAP7D3Q8IWC1 876 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 RHOT1Q8IXI2 618 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 CHPFQ8IZ52 775 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 UMODL1-AS1Q8N2C9 162 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 RNF10Q8N5U6 811 aaKnown RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 DCAF4L2Q8NA75 395 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 TXNDC5Q8NBS9 432 aaKnown RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 C2orf49Q9BVC5 232 aaPredicted RBP20.25■□□□□ 0.83
LIME1-205ENST00000480139 MUC3BQ9H195 1237 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 MAGEH1Q9H213 219 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 NDFIP2Q9NV92 336 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 VPS28Q9UK41 221 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 FBXO4Q9UKT5 387 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 PLA2G4CQ9UP65 541 aa20.25■□□□□ 0.83
LIME1-205ENST00000480139 ZNF487B1APH4 448 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 SGK1O00141 431 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 DAPK3O43293 454 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 LAMTOR5O43504 91 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 PSTPIP1O43586 416 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 KRT86O43790 486 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 ADAM23O75077 832 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 CDH6P55285 790 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms