RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ATP5BP06576 529 aaKnown RBP12.7□□□□□ -0.38
HDAC8-217ENST00000478743 PRF1P14222 555 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
HDAC8-217ENST00000478743 CSKP41240 450 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 SPIDRQ14159 915 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 MPPE1Q53F39 396 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 SLC35F3Q8IY50 421 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 GPD1LQ8N335 351 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 ZSCAN1Q8NBB4 408 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 RAD54LQ92698 747 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 TUBD1Q9UJT1 453 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 SHANK1Q9Y566 2161 aa12.7□□□□□ -0.38
HDAC8-217ENST00000478743 NVLO15381 856 aaKnown RBP12.69□□□□□ -0.38
HDAC8-217ENST00000478743 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
HDAC8-217ENST00000478743 IL1BP01584 269 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 C5AR1P21730 350 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
HDAC8-217ENST00000478743 TAS2R38P59533 333 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 COG7P83436 770 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 RFWD3Q6PCD5 774 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 MAMDC2Q7Z304 686 aaPredicted RBP12.69□□□□□ -0.38
HDAC8-217ENST00000478743 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 ZNF516Q92618 1163 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 DUSP23Q9BVJ7 150 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 SLCO3A1Q9UIG8 710 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 LOXL2Q9Y4K0 774 aa12.69□□□□□ -0.38
HDAC8-217ENST00000478743 APCP25054 2843 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 GOLGA6L7A0A1B0GV03 622 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 REC8O95072 547 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 GCNT3O95395 438 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 ADH1BP00325 375 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 FAM163BP0C2L3 166 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 FAM200BP0CF97 657 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 ABCD1P33897 745 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 KIF11P52732 1056 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 NR0B2Q15466 257 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 TRIP4Q15650 581 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-217ENST00000478743 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-217ENST00000478743 CCDC186Q7Z3E2 898 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 TMPRSS9Q7Z410 1059 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 PMEPA1Q969W9 287 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 TTC17Q96AE7 1141 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 ABHD17AQ96GS6 310 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 TWNKQ96RR1 684 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 TCEAL2Q9H3H9 227 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-217ENST00000478743 MRPL44Q9H9J2 332 aaKnown RBP12.68□□□□□ -0.38
HDAC8-217ENST00000478743 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 ERVW-1Q9UQF0 538 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 PCDHA5Q9Y5H7 936 aa12.68□□□□□ -0.38
HDAC8-217ENST00000478743 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 HIVEP3Q5T1R4 2406 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 PRR19A6NJB7 356 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 D6RAR5 112 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 DUX1O43812 170 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 TBL1XO60907 577 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 RNGTTO60942 597 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 JMJD7P0C870 316 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 DLATP10515 647 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 SLC6A4P31645 630 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 ARSDP51689 593 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 FZD2Q14332 565 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 FSCBQ5H9T9 825 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 DSG4Q86SJ6 1040 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 ZC3H18Q86VM9 953 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 RBFAQ8N0V3 343 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 KCTD17Q8N5Z5 321 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 TPCN2Q8NHX9 752 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 USP7Q93009 1102 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 TMA16Q96EY4 203 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 PRICKLE1Q96MT3 831 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 GPR27Q9NS67 375 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
HDAC8-217ENST00000478743 TP53TG5Q9Y2B4 290 aa12.67□□□□□ -0.38
HDAC8-217ENST00000478743 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 NEMP2A6NFY4 417 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
HDAC8-217ENST00000478743 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
HDAC8-217ENST00000478743 RALAP11233 206 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 LIFP15018 202 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 NDST1P52848 882 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 MAPK10P53779 464 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms