RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CLDN6P56747 220 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 KRT85P78386 507 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 SULT2A1Q06520 285 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 OVGP1Q12889 678 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 BNIP3Q12983 259 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 SLC12A1Q13621 1099 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 COBLL1Q53SF7 1204 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 DCAF6Q58WW2 860 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 RNF219Q5W0B1 726 aaPredicted RBP9.98□□□□□ -0.81
CCM2-210ENST00000478169 TBC1D3GQ6DHY5 549 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 TBC1D3CQ6IPX1 549 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 MMS22LQ6ZRQ5 1243 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 BEND5Q7L4P6 421 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 KANSL1Q7Z3B3 1105 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 PRPF39Q86UA1 669 aaKnown RBP9.98□□□□□ -0.81
CCM2-210ENST00000478169 TBC1D3Q8IZP1 549 aaPredicted RBP9.98□□□□□ -0.81
CCM2-210ENST00000478169 CFAP52Q8N1V2 620 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 STK40Q8N2I9 435 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 DQX1Q8TE96 717 aaKnown RBP9.98□□□□□ -0.81
CCM2-210ENST00000478169 CLEC4CQ8WTT0 213 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 SLC35C1Q96A29 364 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 FAM131CQ96AQ9 280 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 MYEOVQ96EZ4 313 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 SLC39A13Q96H72 371 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 FCRL3Q96P31 734 aaPredicted RBP9.98□□□□□ -0.81
CCM2-210ENST00000478169 TSG101Q99816 390 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 NUCKS1Q9H1E3 243 aaKnown RBP9.98□□□□□ -0.81
CCM2-210ENST00000478169 DMTF1Q9Y222 760 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 CEP83Q9Y592 693 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 TRPM6Q9BX84 2022 aa9.98□□□□□ -0.81
CCM2-210ENST00000478169 M0QYV0 167 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PIK3R2O00459 728 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 CAPN9O14815 690 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PMM2O15305 246 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 C1QL1O75973 258 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 IL1BP01584 269 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 APOEP02649 317 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PRB1P04280 392 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 ACP1P24666 158 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 MZF1P28698 734 aaPredicted RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 DRD3P35462 400 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 ACTN2P35609 894 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PRCPP42785 496 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 RPL34P49207 117 aaKnown RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 VASPP50552 380 aaPredicted RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 PLK1P53350 603 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PPP2CBP62714 309 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PPP2CAP67775 309 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 E2F1Q01094 437 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 LRMPQ12912 555 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 GPR155Q7Z3F1 870 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 DSG4Q86SJ6 1040 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 SPATS2Q86XZ4 545 aaKnown RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 SMYD4Q8IYR2 804 aaPredicted RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 APCDD1Q8J025 514 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 LGI2Q8N0V4 545 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 DCBLD1Q8N8Z6 715 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 RPL10LQ96L21 214 aaKnown RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 NT5C1BQ96P26 610 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 SPAG5Q96R06 1193 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 ZSWIM1Q9BR11 485 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 TRIM62Q9BVG3 475 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 RMND1Q9NWS8 449 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 ARHGAP20Q9P2F6 1191 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 TJP2Q9UDY2 1190 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 ARMCX3Q9UH62 379 aaPredicted RBP9.97□□□□□ -0.81
CCM2-210ENST00000478169 CYTH4Q9UIA0 394 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 CLCA2Q9UQC9 943 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 NAALADL1Q9UQQ1 740 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 PCDHB4Q9Y5E5 795 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 RAI2Q9Y5P3 530 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 GTF3C3Q9Y5Q9 886 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 MGAQ8IWI9 3026 aa9.97□□□□□ -0.81
CCM2-210ENST00000478169 CAPN8A6NHC0 703 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 RNF225M0QZC1 329 aaPredicted RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 PLRG1O43660 514 aaKnown RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 BRINP1O60477 761 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 TACR2P21452 398 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 GLDCP23378 1020 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 ACADSBP45954 432 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 FMO5P49326 533 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 OXCT1P55809 520 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 NUCB2P80303 420 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 LRRC63Q05C16 580 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 ZNF211Q13398 564 aaPredicted RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 STAT4Q14765 748 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 PROX2Q3B8N5 592 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 TBC1D25Q3MII6 688 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 ZNF658Q5TYW1 1059 aaPredicted RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 FAM46CQ5VWP2 391 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 ANKRD40Q6AI12 368 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 TRIM69Q86WT6 500 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 PIP4P2Q8N4L2 257 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 FRS2Q8WU20 508 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 FAM149B1Q96BN6 582 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 BTN2A3PQ96KV6 586 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 GSDMAQ96QA5 445 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 PPP1R9BQ96SB3 815 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms